C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: acyl-CoA synthetase medium-chain family member 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030935 Acsm3 10090 + 7:119760923-119787513 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000063770 Acsm3-001 119760924-119784891 protein_coding
  ENSMUST00000106526 Acsm3-004 119766371-119784896 protein_coding
  ENSMUST00000106527 Acsm3-002 119760923-119784893 protein_coding
  ENSMUST00000106528 Acsm3-201 119760923-119784889 protein_coding
  ENSMUST00000106529 Acsm3-003 119760924-119787513 protein_coding
  ENSMUST00000149598 Acsm3-006 119777046-119781013 retained_intron
  ENSMUST00000149766 Acsm3-005 119774544-119779229 retained_intron
  ENSMUST00000154828 Acsm3-007 119780736-119781054 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMusclePlacentaENSMUST00000063770ENSMUST00000106526ENSMUST00000106527ENSMUST00000149598ENSMUST00000149766
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Placenta
ENSMUST00000063770 2.431±0.69 1.657±0.61 2.104±0.54 5.308±0.00 0.467±0.16 1.773±0.38 8.714±1.29 0.799±0.00 0.174±0.02 N/A
ENSMUST00000106526 N/A 3.782±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000106527 2.451±0.73 3.611±0.77 3.247±0.74 14.573±3.07 0.235±0.00 1.992±0.33 10.882±2.31 0.777±0.00 0.194±0.01 N/A
ENSMUST00000149598 N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.704±0.00
ENSMUST00000149766 N/A 1.443±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0005759 IDA mitochondrial matrix
GO:0006633 IDA fatty acid biosynthetic process
GO:0015645 IDA fatty acid ligase activity
GO:0046872 IEA metal ion binding
GO:0047760 IEA butyrate-CoA ligase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000004880 acsm3 acyl-CoA synthetase medium-chain family member 3 protein_coding Danio_rerio
ENSG00000005187 ACSM3 acyl-CoA synthetase medium-chain family member 3 protein_coding Homo_sapiens

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