C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: oxysterol binding protein-like 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000006025 OSBPL7 9606 - 17:47807372-47821834 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000007414 OSBPL7-001 47807372-47821770 protein_coding
  ENST00000392507 OSBPL7-201 47807373-47821834 protein_coding
  ENST00000578461 OSBPL7-010 47808216-47809115 nonsense_mediated_decay
  ENST00000579728 OSBPL7-004 47807374-47820858 nonsense_mediated_decay
  ENST00000580140 OSBPL7-002 47815288-47821803 retained_intron
  ENST00000580226 OSBPL7-006 47819333-47821781 retained_intron
  ENST00000580808 OSBPL7-009 47816266-47816924 retained_intron
  ENST00000583167 OSBPL7-005 47807373-47817001 retained_intron
  ENST00000584698 OSBPL7-008 47816587-47819138 retained_intron
  ENST00000585051 OSBPL7-007 47819721-47821741 retained_intron
  ENST00000613735 OSBPL7-202 47807375-47821780 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000007414ENST00000392507ENST00000578461ENST00000580140ENST00000580226ENST00000583167ENST00000584698ENST00000613735
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000007414 0.694±0.00 N/A 1.158±0.00 1.171±0.00 N/A 0.323±0.00 0.754±0.00 N/A N/A N/A 3.444±2.05 0.722±0.52 1.297±0.00
ENST00000392507 N/A 0.172±0.00 0.073±0.00 N/A 1.295±0.00 0.034±0.00 0.322±0.22 N/A N/A N/A 1.540±0.00 0.325±0.00 0.265±0.00
ENST00000578461 N/A N/A N/A 2.299±0.00 4.340±0.00 N/A N/A 0.753±0.00 N/A N/A N/A N/A 0.534±0.00
ENST00000580140 N/A 0.124±0.00 0.244±0.00 0.499±0.00 N/A N/A N/A N/A N/A 0.300±0.00 N/A N/A N/A
ENST00000580226 N/A N/A N/A N/A N/A N/A N/A N/A 1.136±0.00 2.120±0.00 N/A N/A N/A
ENST00000583167 N/A N/A N/A 0.373±0.00 N/A N/A N/A N/A 0.223±0.00 N/A 1.475±0.29 N/A 0.052±0.00
ENST00000584698 N/A 1.183±0.00 N/A N/A N/A N/A N/A 1.343±0.00 N/A 0.502±0.00 N/A N/A N/A
ENST00000613735 0.424±0.00 N/A 0.600±0.00 0.372±0.00 0.471±0.00 N/A N/A 0.134±0.00 N/A N/A N/A N/A 0.094±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RQ CIL_0007RQ_0001 VISTA 17:47700006-48306250
CIL_0004DC CIL_0004DC_0002 CGP 17:47733244-47821834
CIL_0007WA CIL_0007WA_0001 VISTA 17:47751636-48352675
CIL_0004DD CIL_0004DD_0002 CGP 17:47807372-47831534

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005776 IDA autophagic vacuole
GO:0005829 IDA cytosol
GO:0005886 IDA plasma membrane
GO:0006869 IEA lipid transport
GO:0015485 IDA cholesterol binding
GO:0071397 IMP cellular response to cholesterol
GO:0097038 IDA perinuclear endoplasmic reticulum
GO:1901800 IMP positive regulation of proteasomal protein catabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000012981 osbpl7 oxysterol binding protein-like 7 protein_coding Danio_rerio
ENSMUSG00000038534 Osbpl7 oxysterol binding protein-like 7 protein_coding Mus_musculus

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