C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: adaptor-related protein complex 2, beta 1 subunit
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000006125 AP2B1 9606 + 17:35578046-35726409 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000587805 AP2B1-018 35650650-35660120 protein_coding
  ENST00000588093 AP2B1-012 35587531-35601037 processed_transcript
  ENST00000588116 AP2B1-017 35624582-35657615 nonsense_mediated_decay
  ENST00000589774 AP2B1-009 35578046-35608315 protein_coding
  ENST00000590432 AP2B1-010 35587416-35605801 protein_coding
  ENST00000590538 AP2B1-014 35587322-35608165 nonsense_mediated_decay
  ENST00000591561 AP2B1-016 35607837-35626720 processed_transcript
  ENST00000591610 AP2B1-013 35587322-35608292 nonsense_mediated_decay
  ENST00000592167 AP2B1-015 35587566-35605766 nonsense_mediated_decay
  ENST00000593014 AP2B1-011 35587738-35608260 protein_coding
  ENST00000610402 AP2B1-022 35587322-35723917 protein_coding
  ENST00000612035 AP2B1-005 35587322-35670898 protein_coding
  ENST00000612116 AP2B1-006 35587452-35670898 protein_coding
  ENST00000614600 AP2B1-007 35587367-35670898 protein_coding
  ENST00000616681 AP2B1-021 35587314-35724086 protein_coding
  ENST00000616784 AP2B1-001 35586899-35657791 protein_coding
  ENST00000618940 AP2B1-201 35587515-35724086 protein_coding
  ENST00000619183 AP2B1-008 35621275-35670898 processed_transcript
  ENST00000620039 AP2B1-020 35587314-35724089 nonsense_mediated_decay
  ENST00000621668 AP2B1-004 35587314-35670898 protein_coding
  ENST00000621914 AP2B1-019 35587274-35726409 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000610402ENST00000612035ENST00000616681ENST00000621914
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000610402 N/A N/A 3.769±0.00 N/A 4.074±0.00 7.084±0.00 4.139±0.61 N/A 3.036±0.00 4.958±0.00 3.559±0.87 5.343±0.00 N/A 21.695±3.07
ENST00000612035 N/A N/A N/A N/A 5.947±0.00 N/A 2.796±0.00 N/A 4.147±0.00 5.714±0.00 3.294±0.00 N/A N/A N/A
ENST00000616681 N/A N/A N/A N/A N/A N/A 5.003±0.00 N/A N/A N/A N/A N/A N/A 69.656±0.00
ENST00000621914 17.949±0.00 8.177±0.00 6.385±0.00 35.107±22.27 14.006±7.22 13.111±3.32 8.322±6.21 20.190±17.54 4.765±0.89 17.332±9.16 8.108±0.00 17.194±6.76 28.939±4.13 15.837±1.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003JS CIL_0003JS_0001 CGP 17:35548125-35578863
CIL_0003JV CIL_0003JV_0001 CGP 17:35574795-35726409

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005515 IEA protein binding
GO:0005829 TAS cytosol
GO:0005886 TAS plasma membrane
GO:0005905 IEA coated pit
GO:0006886 IEA intracellular protein transport
GO:0006897 IEA endocytosis
GO:0007173 TAS epidermal growth factor receptor signaling pathway
GO:0007268 TAS synaptic transmission
GO:0007411 TAS axon guidance
GO:0008565 IEA protein transporter activity
GO:0015031 IEA protein transport
GO:0016020 IDA membrane
GO:0016032 TAS viral process
GO:0016192 IEA vesicle-mediated transport
GO:0019886 TAS antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0030117 IEA membrane coat
GO:0030131 IEA clathrin adaptor complex
GO:0030276 IPI clathrin binding
GO:0030666 TAS endocytic vesicle membrane
GO:0030669 TAS clathrin-coated endocytic vesicle membrane
GO:0042059 TAS negative regulation of epidermal growth factor receptor signaling pathway
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0048011 TAS neurotrophin TRK receptor signaling pathway
GO:0050690 TAS regulation of defense response to virus by virus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000035152 ap2b1 adaptor-related protein complex 2, beta 1 subunit protein_coding Danio_rerio
ENSMUSG00000035152 Ap2b1 adaptor-related protein complex 2, beta 1 subunit protein_coding Mus_musculus

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