C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: CD79b molecule, immunoglobulin-associated beta
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000007312 CD79B 9606 - 17:63928740-63932354 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000006750 CD79B-001 63928740-63932354 protein_coding
  ENST00000349817 CD79B-004 63929226-63932261 protein_coding
  ENST00000392795 CD79B-002 63928740-63932336 protein_coding
  ENST00000558969 CD79B-005 63930960-63932331 retained_intron
  ENST00000559358 CD79B-003 63928768-63930514 retained_intron
  ENST00000583260 CD79B-006 63931891-63932323 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000006750ENST00000349817ENST00000392795ENST00000558969ENST00000559358
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000006750 N/A 24.293±0.00 N/A N/A N/A 0.541±0.00 0.325±0.00 0.455±0.00 N/A 1.103±0.00 N/A 0.149±0.00 1.545±0.23 0.153±0.00
ENST00000349817 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.952±0.00 N/A N/A
ENST00000392795 2.542±0.00 98.792±0.00 0.093±0.00 N/A 1.471±1.07 2.900±0.00 3.286±0.00 1.131±0.00 0.974±0.01 2.730±1.99 1.062±0.00 0.646±0.50 1.663±0.77 0.583±0.10
ENST00000558969 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.382±0.00
ENST00000559358 0.797±0.00 N/A N/A 0.129±0.00 1.065±0.00 2.923±0.91 N/A 0.558±0.00 0.158±0.00 0.745±0.00 N/A 0.949±0.46 2.448±1.08 0.934±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B9 CIL_0009B9_0001 VISTA 17:63374232-63977730
CIL_0006Q7 CIL_0006Q7_0001 CGP 17:63917200-63932354
CIL_0006Q8 CIL_0006Q8_0001 CGP 17:63928740-63972918

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004888 IEA transmembrane signaling receptor activity
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005794 IDA Golgi apparatus
GO:0005886 IDA plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006955 TAS immune response
GO:0007165 TAS signal transduction
GO:0007166 IEA cell surface receptor signaling pathway
GO:0009897 IEA external side of plasma membrane
GO:0016020 IEA membrane
GO:0019815 IEA B cell receptor complex
GO:0050853 IEA B cell receptor signaling pathway
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000040592 Cd79b CD79B antigen protein_coding Mus_musculus

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