C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0006Q8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000007312-ENSG00000007314 CGP 9606 17:63928740-63972918
GeneTranscriptPositionBiotype
ENSG00000007312 (CD79B)
CD79b molecule, immunoglobulin-associated beta
ENST00000006750 (CD79B-001) 63928740-63932354 protein_coding
ENST00000349817 (CD79B-004) 63929226-63932261 protein_coding
ENST00000392795 (CD79B-002) 63928740-63932336 protein_coding
ENST00000558969 (CD79B-005) 63930960-63932331 retained_intron
ENST00000559358 (CD79B-003) 63928768-63930514 retained_intron
ENST00000583260 (CD79B-006) 63931891-63932323 retained_intron
ENSG00000007314 (SCN4A)
sodium channel, voltage-gated, type IV, alpha subunit
ENST00000435607 (SCN4A-201) 63938554-63972918 protein_coding
ENST00000578147 (SCN4A-001) 63938554-63972918 protein_coding
ENST00000581514 (SCN4A-002) 63959373-63961693 retained_intron
ENST00000584310 (SCN4A-003) 63947954-63949704 retained_intron
CIL_0006Q8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000040592-ENSMUSG00000001027 CGP 10090 11:106311341-106353288
GeneTranscriptPositionBiotype
ENSMUSG00000001027 (Scn4a)
sodium channel, voltage-gated, type IV, alpha
ENSMUST00000021056 (Scn4a-001) 106318592-106349389 protein_coding
ENSMUST00000174877 (Scn4a-002) 106349455-106353288 processed_transcript
ENSMUSG00000040592 (Cd79b)
CD79B antigen
ENSMUST00000044228 (Cd79b-001) 106311341-106314762 protein_coding
ENSMUST00000167143 (Cd79b-201) 106311344-106314529 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006Q8_0001ENSG00000007312ENST00000006750ENST00000349817ENST00000392795ENST00000558969ENST00000559358ENST00000583260ENSG00000007314ENST00000435607ENST00000578147ENST00000581514ENST00000584310CIL_0006Q8_0002ENSMUSG00000001027ENSMUST00000021056ENSMUST00000174877ENSMUSG00000040592ENSMUST00000044228ENSMUST00000167143
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006Q8_0001ENSG00000007312ENST00000006750ENST00000349817ENST00000392795ENST00000558969ENST00000559358ENSG00000007314ENST00000435607ENST00000578147ENST00000581514ENST00000584310CIL_0006Q8_0002ENSMUSG00000001027ENSMUST00000021056ENSMUST00000174877ENSMUSG00000040592ENSMUST00000044228ENSMUST00000167143
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000007312 ENST00000006750 N/A 24.293±0.00 N/A N/A N/A 0.541±0.00 0.325±0.00 0.455±0.00 N/A 1.103±0.00 N/A 0.149±0.00 1.545±0.23 0.153±0.00
ENST00000349817 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.952±0.00 N/A N/A
ENST00000392795 2.542±0.00 98.792±0.00 0.093±0.00 N/A 1.471±1.07 2.900±0.00 3.286±0.00 1.131±0.00 0.974±0.01 2.730±1.99 1.062±0.00 0.646±0.50 1.663±0.77 0.583±0.10
ENST00000558969 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.382±0.00
ENST00000559358 0.797±0.00 N/A N/A 0.129±0.00 1.065±0.00 2.923±0.91 N/A 0.558±0.00 0.158±0.00 0.745±0.00 N/A 0.949±0.46 2.448±1.08 0.934±0.00
ENST00000583260 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000007314 ENST00000435607 N/A N/A 0.049±0.00 0.010±0.01 0.302±0.00 0.012±0.00 N/A N/A N/A N/A 8.992±0.00 0.036±0.00 0.064±0.01 N/A
ENST00000578147 N/A N/A N/A 0.010±0.01 0.640±0.00 N/A N/A N/A N/A 0.035±0.00 5.805±0.00 N/A 0.053±0.00 0.366±0.00
ENST00000581514 N/A N/A N/A N/A N/A 0.638±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584310 N/A N/A N/A N/A N/A N/A N/A N/A 0.621±0.00 0.119±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000001027 ENSMUST00000021056 0.025±0.01 0.016±0.01 0.047±0.00 0.012±0.01 5.176±0.00 0.047±0.03 1.827±0.38 0.098±0.08 0.013±0.01 0.346±0.18 11.937±2.29 0.094±0.06 0.074±0.12 0.081±0.01
ENSMUST00000174877 0.119±0.00 0.261±0.00 N/A 0.077±0.00 N/A N/A N/A N/A N/A 0.822±0.00 N/A 0.140±0.04 0.067±0.00 N/A
ENSMUSG00000040592 ENSMUST00000044228 0.880±0.35 0.479±0.22 0.193±0.07 0.112±0.03 8.895±0.65 2.047±0.69 0.536±0.00 0.894±0.57 0.913±0.50 2.222±0.15 N/A 0.741±0.37 0.125±0.04 0.081±0.00
ENSMUST00000167143 1.061±0.37 0.357±0.00 0.403±0.07 0.084±0.02 63.492±14.27 4.420±1.00 2.437±1.53 3.430±2.54 3.562±4.15 16.126±2.97 1.827±4.04 1.030±0.85 0.426±0.29 0.072±0.01

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