C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transketolase-like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000007350 TKTL1 9606 + X:154295671-154330350 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000369912 TKTL1-001 154305057-154330350 protein_coding
  ENST00000369915 TKTL1-002 154295671-154330350 protein_coding
  ENST00000426203 TKTL1-006 154305044-154311146 protein_coding
  ENST00000426989 TKTL1-005 154304923-154311160 protein_coding
  ENST00000439635 TKTL1-009 154295799-154312640 nonsense_mediated_decay
  ENST00000463884 TKTL1-003 154327376-154329688 processed_transcript
  ENST00000465168 TKTL1-007 154320304-154325385 processed_transcript
  ENST00000482044 TKTL1-004 154327184-154327899 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000369912ENST00000369915ENST00000426203ENST00000463884ENST00000465168ENST00000482044
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000369912 N/A N/A N/A 0.055±0.00 0.087±0.00 N/A 0.073±0.00 N/A 0.044±0.00 0.007±0.00 0.127±0.05 N/A
ENST00000369915 N/A 0.100±0.00 N/A 0.053±0.00 N/A N/A N/A 0.124±0.00 N/A 0.007±0.00 1.173±0.00 90.094±2.17
ENST00000426203 N/A N/A N/A N/A N/A N/A N/A 0.479±0.00 N/A N/A 0.107±0.00 116.137±0.00
ENST00000463884 0.306±0.00 N/A 0.172±0.00 0.264±0.00 N/A N/A N/A 1.120±0.00 N/A N/A N/A N/A
ENST00000465168 N/A N/A N/A N/A N/A 0.201±0.00 N/A N/A N/A N/A N/A N/A
ENST00000482044 N/A N/A N/A N/A N/A N/A N/A N/A 0.253±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00032W CIL_00032W_0001 CGP X:154257538-154295853
CIL_0001L7 CIL_0001L7_0001 CGP X:154271265-154330350
CIL_0001L8 CIL_0001L8_0001 CGP X:154295671-154374638

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004802 IEA transketolase activity
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006007 TAS glucose catabolic process
GO:0006772 TAS thiamine metabolic process
GO:0008152 IEA metabolic process
GO:0016624 IEA oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000006019 tktb transketolase b protein_coding Danio_rerio
ENSMUSG00000031397 Tktl1 transketolase-like 1 protein_coding Mus_musculus

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