C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00032W_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000269433-ENSG00000278057 CGP 9606 X:154257538-154295853
GeneTranscriptPositionBiotype
ENSG00000007350 (TKTL1)
transketolase-like 1 		ENST00000369912 (TKTL1-001) 154305057-154330350 protein_coding
ENST00000369915 (TKTL1-002) 154295671-154330350 protein_coding
ENST00000426203 (TKTL1-006) 154305044-154311146 protein_coding
ENST00000426989 (TKTL1-005) 154304923-154311160 protein_coding
ENST00000439635 (TKTL1-009) 154295799-154312640 nonsense_mediated_decay
ENST00000463884 (TKTL1-003) 154327376-154329688 processed_transcript
ENST00000465168 (TKTL1-007) 154320304-154325385 processed_transcript
ENST00000482044 (TKTL1-004) 154327184-154327899 processed_transcript
CIL_00032W_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031394-ENSMUSG00000062564 CGP 10090 X:74127464-74167838
GeneTranscriptPositionBiotype
ENSMUSG00000031393 (Mecp2)
methyl CpG binding protein 2 		ENSMUST00000033770 (Mecp2-002) 74035288-74085690 protein_coding
ENSMUST00000100750 (Mecp2-001) 74026592-74085638 protein_coding
ENSMUST00000123362 (Mecp2-003) 74035289-74085609 protein_coding
ENSMUST00000140399 (Mecp2-004) 74035670-74085609 protein_coding
ENSMUST00000170481 (Mecp2-201) 74026828-74135363 protein_coding
ENSMUSG00000031394 (Opn1mw)
opsin 1 (cone pigments), medium-wave-sensitive (color blindness, deutan) 		ENSMUST00000033771 (Opn1mw-001) 74127464-74150760 protein_coding
ENSMUST00000101457 (Opn1mw-002) 74127466-74150751 protein_coding
ENSMUST00000123401 (Opn1mw-005) 74137903-74150756 processed_transcript
ENSMUST00000127445 (Opn1mw-006) 74138421-74150756 protein_coding
ENSMUST00000135307 (Opn1mw-003) 74127481-74143549 processed_transcript
ENSMUST00000145443 (Opn1mw-004) 74137924-74139866 processed_transcript
ENSMUSG00000062564 (Tex28)
testis expressed 28 		ENSMUST00000078060 (Tex28-201) 74150944-74167838 protein_coding
ENSMUST00000114328 (Tex28-001) 74150944-74167838 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00032W_0001ENSG00000007350ENST00000369912ENST00000369915ENST00000426203ENST00000426989ENST00000439635ENST00000463884ENST00000465168ENST00000482044CIL_00032W_0002ENSMUSG00000031393ENSMUST00000033770ENSMUST00000100750ENSMUST00000123362ENSMUST00000140399ENSMUST00000170481ENSMUSG00000031394ENSMUST00000033771ENSMUST00000101457ENSMUST00000123401ENSMUST00000127445ENSMUST00000135307ENSMUST00000145443ENSMUSG00000062564ENSMUST00000078060ENSMUST00000114328
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00032W_0001ENSG00000007350ENST00000369912ENST00000369915ENST00000426203ENST00000463884ENST00000465168ENST00000482044CIL_00032W_0002ENSMUSG00000031393ENSMUST00000033770ENSMUST00000100750ENSMUST00000123362ENSMUST00000170481ENSMUSG00000031394ENSMUST00000033771ENSMUST00000101457ENSMUST00000123401ENSMUST00000127445ENSMUST00000135307ENSMUST00000145443ENSMUSG00000062564ENSMUST00000078060ENSMUST00000114328
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000007350 ENST00000369912 N/A N/A N/A N/A N/A 0.055±0.00 0.087±0.00 N/A 0.073±0.00 N/A 0.044±0.00 0.007±0.00 0.127±0.05 N/A
ENST00000369915 N/A N/A N/A 0.100±0.00 N/A 0.053±0.00 N/A N/A N/A 0.124±0.00 N/A 0.007±0.00 1.173±0.00 90.094±2.17
ENST00000426203 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.479±0.00 N/A N/A 0.107±0.00 116.137±0.00
ENST00000426989 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439635 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463884 0.306±0.00 N/A N/A N/A 0.172±0.00 0.264±0.00 N/A N/A N/A 1.120±0.00 N/A N/A N/A N/A
ENST00000465168 N/A N/A N/A N/A N/A N/A N/A 0.201±0.00 N/A N/A N/A N/A N/A N/A
ENST00000482044 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.253±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031393 ENSMUST00000033770 N/A N/A N/A N/A N/A 1.059±0.00 N/A N/A 1.467±0.34 N/A N/A N/A 2.376±0.82 0.233±0.01
ENSMUST00000100750 1.084±0.52 1.616±0.93 1.160±0.23 3.266±1.23 1.178±0.52 1.514±0.53 0.725±0.00 0.538±0.11 0.888±0.37 2.095±0.39 1.767±0.48 1.822±1.03 0.554±0.29 0.202±0.13
ENSMUST00000123362 N/A N/A N/A N/A N/A 1.121±0.00 N/A N/A 0.754±0.16 N/A N/A N/A N/A N/A
ENSMUST00000140399 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170481 3.095±2.14 2.218±0.70 1.053±0.13 4.409±0.74 2.681±1.22 1.492±0.12 2.247±0.20 3.283±0.42 0.866±0.15 2.196±1.00 2.303±0.32 3.055±1.27 0.791±0.22 0.210±0.11
ENSMUSG00000031394 ENSMUST00000033771 N/A N/A 0.011±0.00 0.030±0.03 0.183±0.08 N/A 0.011±0.00 0.026±0.01 0.008±0.00 N/A 0.117±0.06 N/A 0.013±0.00 N/A
ENSMUST00000101457 N/A N/A 0.003±0.00 0.001±0.00 N/A N/A 0.011±0.00 0.003±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000123401 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.109±0.03 N/A N/A N/A
ENSMUST00000127445 N/A N/A N/A N/A 0.321±0.16 N/A N/A N/A N/A N/A 0.201±0.10 0.257±0.00 0.236±0.13 N/A
ENSMUST00000135307 N/A 0.131±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.136±0.03 N/A 0.356±0.35 N/A
ENSMUST00000145443 N/A N/A N/A N/A N/A N/A N/A 0.172±0.00 N/A N/A 0.170±0.07 N/A N/A N/A
ENSMUSG00000062564 ENSMUST00000078060 N/A N/A 0.003±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.004±0.00 0.332±0.21
ENSMUST00000114328 N/A N/A 0.003±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.004±0.00 0.328±0.22

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