C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: STARD3 N-terminal like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000010270 STARD3NL 9606 + 7:38178222-38230671 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000009041 STARD3NL-001 38178222-38230671 protein_coding
  ENST00000396013 STARD3NL-002 38178351-38230381 protein_coding
  ENST00000429075 STARD3NL-003 38178395-38219629 protein_coding
  ENST00000434197 STARD3NL-007 38178263-38230379 protein_coding
  ENST00000440144 STARD3NL-004 38178376-38217305 protein_coding
  ENST00000453225 STARD3NL-005 38178390-38217269 protein_coding
  ENST00000471550 STARD3NL-006 38178324-38230670 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000009041ENST00000396013ENST00000429075ENST00000434197ENST00000471550
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000009041 5.496±0.00 6.016±0.00 1.086±0.00 10.904±0.07 3.804±0.55 3.712±2.34 4.164±2.10 6.937±6.52 3.282±1.39 7.556±4.39 0.915±0.25 9.305±2.62 12.882±2.20 6.619±1.00
ENST00000396013 N/A 3.206±0.00 N/A N/A 1.096±0.00 2.342±0.00 N/A N/A 1.416±0.00 N/A 0.682±0.00 5.380±1.47 5.666±1.80 7.560±3.09
ENST00000429075 N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.443±0.00 N/A N/A N/A N/A
ENST00000434197 5.711±0.00 N/A 0.784±0.00 3.505±0.00 1.949±1.24 2.889±0.00 2.101±0.00 3.134±2.56 N/A 5.534±0.00 0.434±0.00 3.116±0.56 5.682±2.77 7.697±0.00
ENST00000471550 N/A N/A N/A N/A 0.296±0.00 N/A N/A 0.363±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006IE CIL_0006IE_0002 CGP 7:38178222-38631567

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005765 IDA lysosomal membrane
GO:0005768 IEA endosome
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045421 stard3nl STARD3 N-terminal like protein_coding Danio_rerio
ENSMUSG00000003062 Stard3nl STARD3 N-terminal like protein_coding Mus_musculus

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