C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006IE_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000045421-ENSDARG00000007663 CGP 7955 2:31556322-31654841
GeneTranscriptPositionBiotype
ENSDARG00000007663 (amph)
amphiphysin 		ENSDART00000027689 (amph-201) 31609102-31654841 protein_coding
ENSDARG00000045421 (stard3nl)
STARD3 N-terminal like 		ENSDART00000066789 (stard3nl-201) 31556322-31570969 protein_coding
ENSDARG00000085812 (5S_rRNA)
5S ribosomal RNA 		ENSDART00000121212 (5S_rRNA.1379-201) 31633882-31633998 rRNA
CIL_0006IE_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000010270-ENSG00000078053 CGP 9606 7:38178222-38631567
GeneTranscriptPositionBiotype
ENSG00000010270 (STARD3NL)
STARD3 N-terminal like 		ENST00000009041 (STARD3NL-001) 38178222-38230671 protein_coding
ENST00000396013 (STARD3NL-002) 38178351-38230381 protein_coding
ENST00000429075 (STARD3NL-003) 38178395-38219629 protein_coding
ENST00000434197 (STARD3NL-007) 38178263-38230379 protein_coding
ENST00000440144 (STARD3NL-004) 38178376-38217305 protein_coding
ENST00000453225 (STARD3NL-005) 38178390-38217269 protein_coding
ENST00000471550 (STARD3NL-006) 38178324-38230670 retained_intron
ENSG00000078053 (AMPH)
amphiphysin 		ENST00000325590 (AMPH-002) 38383704-38631420 protein_coding
ENST00000356264 (AMPH-001) 38383704-38631567 protein_coding
ENST00000441628 (AMPH-003) 38384818-38463113 protein_coding
ENST00000450124 (AMPH-006) 38391988-38429285 nonsense_mediated_decay
ENST00000460887 (AMPH-009) 38389848-38392719 processed_transcript
ENST00000462072 (AMPH-007) 38394070-38430055 retained_intron
ENST00000467580 (AMPH-005) 38391988-38429285 processed_transcript
ENST00000471913 (AMPH-004) 38391988-38429285 processed_transcript
ENST00000475581 (AMPH-008) 38391891-38418031 retained_intron
ENSG00000211688 (TRGJP2)
T cell receptor gamma joining P2 		ENST00000390334 (TRGJP2-001) 38256337-38256396 TR_J_gene
ENSG00000211689 (TRGC1)
T cell receptor gamma constant 1 		ENST00000443402 (TRGC1-001) 38257879-38265678 TR_C_gene
ENST00000610889 (TRGC1-201) 38260088-38317492 TR_C_gene
ENST00000613738 (TRGC1-202) 38259643-38330821 TR_C_gene
ENST00000619762 (TRGC1-203) 38259643-38317644 TR_C_gene
ENSG00000211693 (TRGV11)
T cell receptor gamma variable 11 (non-functional) 		ENST00000390340 (TRGV11-001) 38291616-38292078 TR_V_gene
ENSG00000211694 (TRGV10)
T cell receptor gamma variable 10 (non-functional) 		ENST00000390341 (TRGV10-001) 38299811-38300322 TR_V_gene
ENSG00000211695 (TRGV9)
T cell receptor gamma variable 9 		ENST00000444775 (TRGV9-001) 38317017-38318861 TR_V_gene
ENSG00000211696 (TRGV8)
T cell receptor gamma variable 8 		ENST00000390343 (TRGV8-001) 38330343-38330935 TR_V_gene
ENSG00000211697 (TRGV5)
T cell receptor gamma variable 5 		ENST00000390344 (TRGV5-001) 38349355-38350022 TR_V_gene
ENST00000613175 (TRGV5-201) 38343894-38350011 TR_V_gene
ENSG00000211698 (TRGV4)
T cell receptor gamma variable 4 		ENST00000390345 (TRGV4-001) 38353715-38354517 TR_V_gene
ENSG00000211699 (TRGV3)
T cell receptor gamma variable 3 		ENST00000390346 (TRGV3-001) 38358512-38359162 TR_V_gene
ENSG00000226212 (TRGV6)
T cell receptor gamma variable 6 (pseudogene) 		ENST00000417928 (TRGV6-001) 38340700-38340998 TR_V_pseudogene
ENSG00000227191 (TRGC2)
T cell receptor gamma constant 2 		ENST00000436911 (TRGC2-001) 38239580-38249572 TR_C_gene
ENST00000610516 (TRGC2-201) 38239595-38330957 TR_C_gene
ENST00000610547 (TRGC2-202) 38239966-38368091 TR_C_gene
ENSG00000228668 (TRGV5P)
T cell receptor gamma variable 5P (pseudogene) 		ENST00000419915 (TRGV5P-001) 38345030-38345499 TR_V_pseudogene
ENSG00000231202 (TRGVB)
T cell receptor gamma variable B (pseudogene) 		ENST00000453257 (TRGVB-001) 38295763-38296233 TR_V_pseudogene
ENSG00000231916 (AC006033.22)
 ENST00000440505 (AC006033.22-001) 38311383-38311808 processed_pseudogene
ENSG00000233306 (TRGV2)
T cell receptor gamma variable 2 		ENST00000426402 (TRGV2-001) 38362864-38363518 TR_V_gene
ENSG00000249978 (TRGV7)
T cell receptor gamma variable 7 (pseudogene) 		ENST00000427089 (TRGV7-001) 38335041-38335514 TR_V_pseudogene
ENSG00000272908 (RP11-121A8.1)
 ENST00000609522 (RP11-121A8.1-001) 38326070-38329643 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006IE_0001ENSDARG00000007663ENSDART00000027689ENSDARG00000045421ENSDART00000066789ENSDARG00000085812ENSDART00000121212CIL_0006IE_0002ENSG00000010270ENST00000009041ENST00000396013ENST00000429075ENST00000434197ENST00000440144ENST00000453225ENST00000471550ENSG00000078053ENST00000325590ENST00000356264ENST00000441628ENST00000450124ENST00000460887ENST00000462072ENST00000467580ENST00000471913ENST00000475581ENSG00000211688ENST00000390334ENSG00000211689ENST00000443402ENST00000610889ENST00000613738ENST00000619762ENSG00000211693ENST00000390340ENSG00000211694ENST00000390341ENSG00000211695ENST00000444775ENSG00000211696ENST00000390343ENSG00000211697ENST00000390344ENST00000613175ENSG00000211698ENST00000390345ENSG00000211699ENST00000390346ENSG00000226212ENST00000417928ENSG00000227191ENST00000436911ENST00000610516ENST00000610547ENSG00000228668ENST00000419915ENSG00000231202ENST00000453257ENSG00000231916ENST00000440505ENSG00000233306ENST00000426402ENSG00000249978ENST00000427089ENSG00000272908ENST00000609522
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006IE_0001ENSDARG00000007663ENSDART00000027689ENSDARG00000045421ENSDART00000066789ENSDARG00000085812ENSDART00000121212CIL_0006IE_0002ENSG00000010270ENST00000009041ENST00000396013ENST00000429075ENST00000434197ENST00000471550ENSG00000078053ENST00000325590ENST00000356264ENST00000441628ENST00000462072ENST00000467580ENST00000471913ENSG00000211688ENST00000390334ENSG00000211689ENST00000443402ENST00000610889ENST00000613738ENST00000619762ENSG00000211693ENST00000390340ENSG00000211694ENST00000390341ENSG00000211695ENST00000444775ENSG00000211696ENST00000390343ENSG00000211697ENST00000390344ENST00000613175ENSG00000211698ENST00000390345ENSG00000211699ENST00000390346ENSG00000226212ENST00000417928ENSG00000227191ENST00000436911ENST00000610516ENST00000610547ENSG00000228668ENST00000419915ENSG00000231202ENST00000453257ENSG00000231916ENST00000440505ENSG00000233306ENST00000426402ENSG00000249978ENST00000427089ENSG00000272908ENST00000609522
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000007663 ENSDART00000027689 N/A N/A N/A 30.693±17.57 N/A N/A 0.020±0.01 0.196±0.08 0.012±0.00 N/A 1.365±0.00 N/A N/A N/A
ENSDARG00000045421 ENSDART00000066789 N/A N/A N/A 11.166±2.12 N/A N/A 7.448±4.73 7.491±2.06 0.813±0.00 N/A 3.324±0.00 N/A N/A N/A
ENSDARG00000085812 ENSDART00000121212 N/A N/A N/A N/A N/A N/A 1.073±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000010270 ENST00000009041 5.496±0.00 6.016±0.00 1.086±0.00 10.904±0.07 3.804±0.55 3.712±2.34 4.164±2.10 6.937±6.52 3.282±1.39 7.556±4.39 0.915±0.25 9.305±2.62 12.882±2.20 6.619±1.00
ENST00000396013 N/A 3.206±0.00 N/A N/A 1.096±0.00 2.342±0.00 N/A N/A 1.416±0.00 N/A 0.682±0.00 5.380±1.47 5.666±1.80 7.560±3.09
ENST00000429075 N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.443±0.00 N/A N/A N/A N/A
ENST00000434197 5.711±0.00 N/A 0.784±0.00 3.505±0.00 1.949±1.24 2.889±0.00 2.101±0.00 3.134±2.56 N/A 5.534±0.00 0.434±0.00 3.116±0.56 5.682±2.77 7.697±0.00
ENST00000440144 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000453225 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471550 N/A N/A N/A N/A 0.296±0.00 N/A N/A 0.363±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000078053 ENST00000325590 1.191±0.00 0.197±0.00 N/A N/A 0.636±0.07 2.076±1.96 0.373±0.21 0.652±0.00 0.213±0.09 N/A N/A 0.507±0.27 0.118±0.06 1.522±0.29
ENST00000356264 4.210±0.00 N/A 0.344±0.00 23.438±8.83 N/A N/A N/A N/A N/A 0.181±0.00 1.696±0.00 N/A N/A N/A
ENST00000441628 N/A N/A N/A N/A N/A N/A N/A 0.553±0.00 N/A N/A N/A N/A 0.022±0.00 N/A
ENST00000450124 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460887 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462072 N/A N/A N/A N/A N/A 0.398±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467580 N/A N/A N/A N/A 0.170±0.00 N/A N/A N/A 0.129±0.00 N/A N/A N/A N/A N/A
ENST00000471913 N/A N/A N/A N/A N/A N/A 0.074±0.00 N/A N/A N/A N/A 0.148±0.05 0.024±0.00 0.759±0.00
ENST00000475581 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000211688 ENST00000390334 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.336±0.00
ENSG00000211689 ENST00000443402 N/A 0.501±0.00 0.216±0.00 0.037±0.00 0.044±0.00 0.020±0.00 0.018±0.01 0.086±0.00 0.019±0.00 N/A N/A 0.041±0.01 0.142±0.00 N/A
ENST00000610889 N/A N/A N/A 0.420±0.00 0.486±0.00 1.090±0.00 N/A N/A N/A N/A N/A 0.098±0.00 N/A N/A
ENST00000613738 N/A N/A N/A N/A N/A N/A 0.059±0.00 0.710±0.00 N/A N/A N/A 0.047±0.00 N/A 0.057±0.00
ENST00000619762 N/A N/A N/A N/A N/A 0.464±0.36 N/A 0.282±0.00 N/A 1.308±0.00 N/A 0.113±0.06 0.301±0.02 N/A
ENSG00000211693 ENST00000390340 N/A 0.050±0.00 N/A N/A N/A N/A N/A N/A N/A 0.246±0.00 N/A N/A N/A 0.023±0.00
ENSG00000211694 ENST00000390341 0.028±0.00 0.688±0.00 N/A N/A 0.715±0.00 0.430±0.32 N/A N/A 0.578±0.55 2.754±0.85 N/A 0.364±0.21 0.113±0.00 0.221±0.14
ENSG00000211695 ENST00000444775 0.172±0.00 N/A 0.272±0.00 N/A 0.199±0.00 N/A N/A N/A N/A N/A 0.054±0.00 N/A 0.564±0.03 N/A
ENSG00000211696 ENST00000390343 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.994±0.00 N/A 0.152±0.00
ENSG00000211697 ENST00000390344 N/A N/A N/A N/A N/A N/A N/A N/A 0.173±0.00 N/A N/A N/A N/A N/A
ENST00000613175 0.028±0.00 0.874±0.00 N/A 0.053±0.00 0.092±0.00 0.240±0.00 0.077±0.00 0.342±0.00 0.114±0.01 0.604±0.31 N/A 0.111±0.05 0.587±0.32 0.703±0.46
ENSG00000211698 ENST00000390345 N/A 1.354±0.00 N/A N/A 0.575±0.43 0.594±0.52 0.125±0.00 N/A N/A 0.948±0.00 N/A 0.112±0.05 0.261±0.10 0.127±0.00
ENSG00000211699 ENST00000390346 0.368±0.00 1.190±0.00 N/A N/A 0.148±0.02 0.621±0.00 0.116±0.00 0.165±0.00 0.055±0.00 1.128±0.84 N/A 0.098±0.01 0.400±0.23 0.163±0.04
ENSG00000226212 ENST00000417928 N/A 0.451±0.00 N/A N/A N/A N/A N/A N/A N/A 0.427±0.00 N/A 0.409±0.00 N/A 0.833±0.38
ENSG00000227191 ENST00000436911 0.492±0.00 1.992±0.00 N/A 0.368±0.21 0.498±0.00 0.212±0.00 0.023±0.00 0.443±0.00 0.076±0.00 3.848±0.50 0.103±0.06 0.714±0.19 0.428±0.16 0.463±0.19
ENST00000610516 N/A N/A 0.705±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000610547 N/A N/A N/A 0.222±0.00 0.963±0.00 N/A 0.035±0.00 N/A 0.206±0.00 N/A N/A 0.057±0.00 N/A 0.191±0.00
ENSG00000228668 ENST00000419915 N/A N/A N/A N/A 1.577±0.00 N/A N/A N/A N/A N/A N/A 0.407±0.00 N/A N/A
ENSG00000231202 ENST00000453257 N/A N/A N/A N/A N/A N/A N/A 0.020±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000231916 ENST00000440505 N/A 0.202±0.00 N/A N/A 0.242±0.00 N/A 0.101±0.00 N/A N/A 0.109±0.00 0.182±0.00 0.372±0.00 0.296±0.00 N/A
ENSG00000233306 ENST00000426402 N/A 0.423±0.00 0.636±0.00 0.097±0.00 0.031±0.00 N/A 0.054±0.00 0.497±0.00 0.462±0.33 0.530±0.19 N/A 0.111±0.04 0.217±0.00 0.227±0.00
ENSG00000249978 ENST00000427089 0.245±0.00 0.291±0.00 N/A N/A 1.942±0.00 0.228±0.00 0.112±0.00 N/A N/A 3.460±2.73 N/A 0.253±0.13 0.392±0.14 0.265±0.00
ENSG00000272908 ENST00000609522 0.016±0.00 0.116±0.00 0.052±0.00 0.054±0.00 0.085±0.00 0.009±0.00 0.035±0.02 0.123±0.04 0.043±0.03 0.227±0.08 N/A 0.092±0.05 0.252±0.09 0.049±0.00

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