C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006IE_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000045421-ENSDARG00000007663 CGP 7955 2:31556322-31654841
GeneTranscriptPositionBiotype
ENSDARG00000007663 (amph)
amphiphysin 		ENSDART00000027689 (amph-201) 31609102-31654841 protein_coding
ENSDARG00000045421 (stard3nl)
STARD3 N-terminal like 		ENSDART00000066789 (stard3nl-201) 31556322-31570969 protein_coding
ENSDARG00000085812 (5S_rRNA)
5S ribosomal RNA 		ENSDART00000121212 (5S_rRNA.1379-201) 31633882-31633998 rRNA

Danio rerio Ensembl (Zv9)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0006IE_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000010270-ENSG00000078053 CGP 9606 7:38178222-38631567
GeneTranscriptPositionBiotype
ENSG00000010270 (STARD3NL)
STARD3 N-terminal like 		ENST00000009041 (STARD3NL-001) 38178222-38230671 protein_coding
ENST00000396013 (STARD3NL-002) 38178351-38230381 protein_coding
ENST00000429075 (STARD3NL-003) 38178395-38219629 protein_coding
ENST00000434197 (STARD3NL-007) 38178263-38230379 protein_coding
ENST00000440144 (STARD3NL-004) 38178376-38217305 protein_coding
ENST00000453225 (STARD3NL-005) 38178390-38217269 protein_coding
ENST00000471550 (STARD3NL-006) 38178324-38230670 retained_intron
ENSG00000078053 (AMPH)
amphiphysin 		ENST00000325590 (AMPH-002) 38383704-38631420 protein_coding
ENST00000356264 (AMPH-001) 38383704-38631567 protein_coding
ENST00000441628 (AMPH-003) 38384818-38463113 protein_coding
ENST00000450124 (AMPH-006) 38391988-38429285 nonsense_mediated_decay
ENST00000460887 (AMPH-009) 38389848-38392719 processed_transcript
ENST00000462072 (AMPH-007) 38394070-38430055 retained_intron
ENST00000467580 (AMPH-005) 38391988-38429285 processed_transcript
ENST00000471913 (AMPH-004) 38391988-38429285 processed_transcript
ENST00000475581 (AMPH-008) 38391891-38418031 retained_intron
ENSG00000211688 (TRGJP2)
T cell receptor gamma joining P2 		ENST00000390334 (TRGJP2-001) 38256337-38256396 TR_J_gene
ENSG00000211689 (TRGC1)
T cell receptor gamma constant 1 		ENST00000443402 (TRGC1-001) 38257879-38265678 TR_C_gene
ENST00000610889 (TRGC1-201) 38260088-38317492 TR_C_gene
ENST00000613738 (TRGC1-202) 38259643-38330821 TR_C_gene
ENST00000619762 (TRGC1-203) 38259643-38317644 TR_C_gene
ENSG00000211693 (TRGV11)
T cell receptor gamma variable 11 (non-functional) 		ENST00000390340 (TRGV11-001) 38291616-38292078 TR_V_gene
ENSG00000211694 (TRGV10)
T cell receptor gamma variable 10 (non-functional) 		ENST00000390341 (TRGV10-001) 38299811-38300322 TR_V_gene
ENSG00000211695 (TRGV9)
T cell receptor gamma variable 9 		ENST00000444775 (TRGV9-001) 38317017-38318861 TR_V_gene
ENSG00000211696 (TRGV8)
T cell receptor gamma variable 8 		ENST00000390343 (TRGV8-001) 38330343-38330935 TR_V_gene
ENSG00000211697 (TRGV5)
T cell receptor gamma variable 5 		ENST00000390344 (TRGV5-001) 38349355-38350022 TR_V_gene
ENST00000613175 (TRGV5-201) 38343894-38350011 TR_V_gene
ENSG00000211698 (TRGV4)
T cell receptor gamma variable 4 		ENST00000390345 (TRGV4-001) 38353715-38354517 TR_V_gene
ENSG00000211699 (TRGV3)
T cell receptor gamma variable 3 		ENST00000390346 (TRGV3-001) 38358512-38359162 TR_V_gene
ENSG00000226212 (TRGV6)
T cell receptor gamma variable 6 (pseudogene) 		ENST00000417928 (TRGV6-001) 38340700-38340998 TR_V_pseudogene
ENSG00000227191 (TRGC2)
T cell receptor gamma constant 2 		ENST00000436911 (TRGC2-001) 38239580-38249572 TR_C_gene
ENST00000610516 (TRGC2-201) 38239595-38330957 TR_C_gene
ENST00000610547 (TRGC2-202) 38239966-38368091 TR_C_gene
ENSG00000228668 (TRGV5P)
T cell receptor gamma variable 5P (pseudogene) 		ENST00000419915 (TRGV5P-001) 38345030-38345499 TR_V_pseudogene
ENSG00000231202 (TRGVB)
T cell receptor gamma variable B (pseudogene) 		ENST00000453257 (TRGVB-001) 38295763-38296233 TR_V_pseudogene
ENSG00000231916 (AC006033.22)
 ENST00000440505 (AC006033.22-001) 38311383-38311808 processed_pseudogene
ENSG00000233306 (TRGV2)
T cell receptor gamma variable 2 		ENST00000426402 (TRGV2-001) 38362864-38363518 TR_V_gene
ENSG00000249978 (TRGV7)
T cell receptor gamma variable 7 (pseudogene) 		ENST00000427089 (TRGV7-001) 38335041-38335514 TR_V_pseudogene
ENSG00000272908 (RP11-121A8.1)
 ENST00000609522 (RP11-121A8.1-001) 38326070-38329643 lincRNA

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006IE_0001ENSDARG00000007663ENSDART00000027689ENSDARG00000045421ENSDART00000066789ENSDARG00000085812ENSDART00000121212CIL_0006IE_0002ENSG00000010270ENST00000009041ENST00000396013ENST00000429075ENST00000434197ENST00000440144ENST00000453225ENST00000471550ENSG00000078053ENST00000325590ENST00000356264ENST00000441628ENST00000450124ENST00000460887ENST00000462072ENST00000467580ENST00000471913ENST00000475581ENSG00000211688ENST00000390334ENSG00000211689ENST00000443402ENST00000610889ENST00000613738ENST00000619762ENSG00000211693ENST00000390340ENSG00000211694ENST00000390341ENSG00000211695ENST00000444775ENSG00000211696ENST00000390343ENSG00000211697ENST00000390344ENST00000613175ENSG00000211698ENST00000390345ENSG00000211699ENST00000390346ENSG00000226212ENST00000417928ENSG00000227191ENST00000436911ENST00000610516ENST00000610547ENSG00000228668ENST00000419915ENSG00000231202ENST00000453257ENSG00000231916ENST00000440505ENSG00000233306ENST00000426402ENSG00000249978ENST00000427089ENSG00000272908ENST00000609522
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006IE_0001ENSDARG00000007663ENSDART00000027689ENSDARG00000045421ENSDART00000066789ENSDARG00000085812ENSDART00000121212CIL_0006IE_0002ENSG00000010270ENST00000009041ENST00000396013ENST00000429075ENST00000434197ENST00000471550ENSG00000078053ENST00000325590ENST00000356264ENST00000441628ENST00000462072ENST00000467580ENST00000471913ENSG00000211688ENST00000390334ENSG00000211689ENST00000443402ENST00000610889ENST00000613738ENST00000619762ENSG00000211693ENST00000390340ENSG00000211694ENST00000390341ENSG00000211695ENST00000444775ENSG00000211696ENST00000390343ENSG00000211697ENST00000390344ENST00000613175ENSG00000211698ENST00000390345ENSG00000211699ENST00000390346ENSG00000226212ENST00000417928ENSG00000227191ENST00000436911ENST00000610516ENST00000610547ENSG00000228668ENST00000419915ENSG00000231202ENST00000453257ENSG00000231916ENST00000440505ENSG00000233306ENST00000426402ENSG00000249978ENST00000427089ENSG00000272908ENST00000609522
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000007663 ENSDART00000027689 N/A N/A N/A 30.693±17.57 N/A N/A 0.020±0.01 0.196±0.08 0.012±0.00 N/A 1.365±0.00 N/A N/A N/A
ENSDARG00000045421 ENSDART00000066789 N/A N/A N/A 11.166±2.12 N/A N/A 7.448±4.73 7.491±2.06 0.813±0.00 N/A 3.324±0.00 N/A N/A N/A
ENSDARG00000085812 ENSDART00000121212 N/A N/A N/A N/A N/A N/A 1.073±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000010270 ENST00000009041 5.496±0.00 6.016±0.00 1.086±0.00 10.904±0.07 3.804±0.55 3.712±2.34 4.164±2.10 6.937±6.52 3.282±1.39 7.556±4.39 0.915±0.25 9.305±2.62 12.882±2.20 6.619±1.00
ENST00000396013 N/A 3.206±0.00 N/A N/A 1.096±0.00 2.342±0.00 N/A N/A 1.416±0.00 N/A 0.682±0.00 5.380±1.47 5.666±1.80 7.560±3.09
ENST00000429075 N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.443±0.00 N/A N/A N/A N/A
ENST00000434197 5.711±0.00 N/A 0.784±0.00 3.505±0.00 1.949±1.24 2.889±0.00 2.101±0.00 3.134±2.56 N/A 5.534±0.00 0.434±0.00 3.116±0.56 5.682±2.77 7.697±0.00
ENST00000440144 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000453225 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471550 N/A N/A N/A N/A 0.296±0.00 N/A N/A 0.363±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000078053 ENST00000325590 1.191±0.00 0.197±0.00 N/A N/A 0.636±0.07 2.076±1.96 0.373±0.21 0.652±0.00 0.213±0.09 N/A N/A 0.507±0.27 0.118±0.06 1.522±0.29
ENST00000356264 4.210±0.00 N/A 0.344±0.00 23.438±8.83 N/A N/A N/A N/A N/A 0.181±0.00 1.696±0.00 N/A N/A N/A
ENST00000441628 N/A N/A N/A N/A N/A N/A N/A 0.553±0.00 N/A N/A N/A N/A 0.022±0.00 N/A
ENST00000450124 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460887 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462072 N/A N/A N/A N/A N/A 0.398±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467580 N/A N/A N/A N/A 0.170±0.00 N/A N/A N/A 0.129±0.00 N/A N/A N/A N/A N/A
ENST00000471913 N/A N/A N/A N/A N/A N/A 0.074±0.00 N/A N/A N/A N/A 0.148±0.05 0.024±0.00 0.759±0.00
ENST00000475581 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000211688 ENST00000390334 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.336±0.00
ENSG00000211689 ENST00000443402 N/A 0.501±0.00 0.216±0.00 0.037±0.00 0.044±0.00 0.020±0.00 0.018±0.01 0.086±0.00 0.019±0.00 N/A N/A 0.041±0.01 0.142±0.00 N/A
ENST00000610889 N/A N/A N/A 0.420±0.00 0.486±0.00 1.090±0.00 N/A N/A N/A N/A N/A 0.098±0.00 N/A N/A
ENST00000613738 N/A N/A N/A N/A N/A N/A 0.059±0.00 0.710±0.00 N/A N/A N/A 0.047±0.00 N/A 0.057±0.00
ENST00000619762 N/A N/A N/A N/A N/A 0.464±0.36 N/A 0.282±0.00 N/A 1.308±0.00 N/A 0.113±0.06 0.301±0.02 N/A
ENSG00000211693 ENST00000390340 N/A 0.050±0.00 N/A N/A N/A N/A N/A N/A N/A 0.246±0.00 N/A N/A N/A 0.023±0.00
ENSG00000211694 ENST00000390341 0.028±0.00 0.688±0.00 N/A N/A 0.715±0.00 0.430±0.32 N/A N/A 0.578±0.55 2.754±0.85 N/A 0.364±0.21 0.113±0.00 0.221±0.14
ENSG00000211695 ENST00000444775 0.172±0.00 N/A 0.272±0.00 N/A 0.199±0.00 N/A N/A N/A N/A N/A 0.054±0.00 N/A 0.564±0.03 N/A
ENSG00000211696 ENST00000390343 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.994±0.00 N/A 0.152±0.00
ENSG00000211697 ENST00000390344 N/A N/A N/A N/A N/A N/A N/A N/A 0.173±0.00 N/A N/A N/A N/A N/A
ENST00000613175 0.028±0.00 0.874±0.00 N/A 0.053±0.00 0.092±0.00 0.240±0.00 0.077±0.00 0.342±0.00 0.114±0.01 0.604±0.31 N/A 0.111±0.05 0.587±0.32 0.703±0.46
ENSG00000211698 ENST00000390345 N/A 1.354±0.00 N/A N/A 0.575±0.43 0.594±0.52 0.125±0.00 N/A N/A 0.948±0.00 N/A 0.112±0.05 0.261±0.10 0.127±0.00
ENSG00000211699 ENST00000390346 0.368±0.00 1.190±0.00 N/A N/A 0.148±0.02 0.621±0.00 0.116±0.00 0.165±0.00 0.055±0.00 1.128±0.84 N/A 0.098±0.01 0.400±0.23 0.163±0.04
ENSG00000226212 ENST00000417928 N/A 0.451±0.00 N/A N/A N/A N/A N/A N/A N/A 0.427±0.00 N/A 0.409±0.00 N/A 0.833±0.38
ENSG00000227191 ENST00000436911 0.492±0.00 1.992±0.00 N/A 0.368±0.21 0.498±0.00 0.212±0.00 0.023±0.00 0.443±0.00 0.076±0.00 3.848±0.50 0.103±0.06 0.714±0.19 0.428±0.16 0.463±0.19
ENST00000610516 N/A N/A 0.705±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000610547 N/A N/A N/A 0.222±0.00 0.963±0.00 N/A 0.035±0.00 N/A 0.206±0.00 N/A N/A 0.057±0.00 N/A 0.191±0.00
ENSG00000228668 ENST00000419915 N/A N/A N/A N/A 1.577±0.00 N/A N/A N/A N/A N/A N/A 0.407±0.00 N/A N/A
ENSG00000231202 ENST00000453257 N/A N/A N/A N/A N/A N/A N/A 0.020±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000231916 ENST00000440505 N/A 0.202±0.00 N/A N/A 0.242±0.00 N/A 0.101±0.00 N/A N/A 0.109±0.00 0.182±0.00 0.372±0.00 0.296±0.00 N/A
ENSG00000233306 ENST00000426402 N/A 0.423±0.00 0.636±0.00 0.097±0.00 0.031±0.00 N/A 0.054±0.00 0.497±0.00 0.462±0.33 0.530±0.19 N/A 0.111±0.04 0.217±0.00 0.227±0.00
ENSG00000249978 ENST00000427089 0.245±0.00 0.291±0.00 N/A N/A 1.942±0.00 0.228±0.00 0.112±0.00 N/A N/A 3.460±2.73 N/A 0.253±0.13 0.392±0.14 0.265±0.00
ENSG00000272908 ENST00000609522 0.016±0.00 0.116±0.00 0.052±0.00 0.054±0.00 0.085±0.00 0.009±0.00 0.035±0.02 0.123±0.04 0.043±0.03 0.227±0.08 N/A 0.092±0.05 0.252±0.09 0.049±0.00

Loading