C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 6 (neurotransmitter transporter), member 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000011083 SLC6A7 9606 + 5:150189957-150222788 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000230671 SLC6A7-001 150189957-150211072 protein_coding
  ENST00000513403 SLC6A7-002 150190251-150195204 retained_intron
  ENST00000524041 SLC6A7-003 150190085-150222788 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalColonLiverOvaryPlacentaTestisENST00000230671ENST00000524041
Transcript ID Adipose Adrenal Colon Liver Ovary Placenta Testis
ENST00000230671 0.035±0.00 0.041±0.00 0.289±0.00 0.006±0.00 0.071±0.01 0.062±0.00 0.099±0.00
ENST00000524041 N/A N/A N/A N/A 0.096±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00091Q CIL_00091Q_0001 VISTA 5:150006686-150608670

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005328 IEA neurotransmitter:sodium symporter activity
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006810 TAS transport
GO:0006836 IEA neurotransmitter transport
GO:0015824 TAS proline transport
GO:0016020 TAS membrane
GO:0016021 IEA integral component of membrane
GO:0055085 TAS transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000030006 SLC6A7 solute carrier family 6 (neurotransmitter transporter), member 7 protein_coding Danio_rerio
ENSMUSG00000052026 Slc6a7 solute carrier family 6 (neurotransmitter transporter, L-proline), member 7 protein_coding Mus_musculus

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