C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: synaptotagmin VII
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000011347 SYT7 9606 - 11:61515313-61581148 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000263846 SYT7-001 61515313-61581148 protein_coding
  ENST00000535826 SYT7-006 61518627-61580872 protein_coding
  ENST00000539008 SYT7-007 61518627-61580820 protein_coding
  ENST00000539246 SYT7-004 61518627-61580820 nonsense_mediated_decay
  ENST00000539468 SYT7-005 61518627-61580820 nonsense_mediated_decay
  ENST00000540677 SYT7-003 61518057-61580826 protein_coding
  ENST00000540831 SYT7-009 61523900-61533103 processed_transcript
  ENST00000542670 SYT7-002 61518627-61580871 protein_coding
  ENST00000542836 SYT7-008 61518627-61580838 protein_coding
  ENST00000545053 SYT7-011 61528011-61580872 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000263846ENST00000535826ENST00000542670ENST00000542836
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000263846 0.949±0.00 0.697±0.00 N/A 11.595±9.75 0.936±0.00 1.003±0.00 1.403±0.00 4.613±0.00 28.875±0.00 0.449±0.22 0.280±0.00 5.023±1.87 14.410±5.73 1.708±1.00
ENST00000535826 N/A N/A N/A N/A N/A N/A 0.177±0.00 N/A N/A N/A N/A 0.751±0.00 N/A N/A
ENST00000542670 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.423±0.00
ENST00000542836 N/A N/A 0.868±0.00 N/A 0.748±0.00 0.443±0.00 0.388±0.00 N/A N/A N/A N/A 8.072±0.00 18.841±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WT CIL_0007WT_0001 VISTA 11:61244303-61847279

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001778 IEA plasma membrane repair
GO:0005215 IEA transporter activity
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0005544 NAS calcium-dependent phospholipid binding
GO:0005764 IEA lysosome
GO:0005886 IEA plasma membrane
GO:0006887 IEA exocytosis
GO:0008021 IEA synaptic vesicle
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0017158 IEA regulation of calcium ion-dependent exocytosis
GO:0030054 IEA cell junction
GO:0031045 IEA dense core granule
GO:0045956 IEA positive regulation of calcium ion-dependent exocytosis
GO:0050796 IEA regulation of insulin secretion
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000063568 SYT7 (1 of 2) synaptotagmin VII protein_coding Danio_rerio
ENSDARG00000078060 syt7b synaptotagmin VIIb protein_coding Danio_rerio
ENSMUSG00000024743 Syt7 synaptotagmin VII protein_coding Mus_musculus

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