C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: synaptotagmin VII
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024743 Syt7 10090 + 19:10389090-10453181 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000073899 Syt7-201 10389090-10453181 protein_coding
  ENSMUST00000076968 Syt7-202 10389090-10453181 protein_coding
  ENSMUST00000169121 Syt7-203 10389090-10453181 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000073899ENSMUST00000076968ENSMUST00000169121
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000073899 0.554±0.18 1.158±0.41 0.186±0.07 5.511±0.00 0.439±0.32 1.640±0.00 0.771±0.00 0.817±0.18 0.111±0.05 0.155±0.07 6.156±2.55 0.216±0.15 0.945±0.39
ENSMUST00000076968 0.297±0.00 0.568±0.00 0.188±0.00 11.299±5.28 0.191±0.00 N/A 1.903±0.00 0.405±0.00 0.040±0.02 0.195±0.10 1.639±0.44 0.096±0.08 0.607±0.13
ENSMUST00000169121 0.246±0.09 1.255±0.00 N/A 7.008±3.41 0.191±0.03 N/A 0.925±0.02 N/A 0.037±0.02 0.077±0.02 2.248±0.13 0.066±0.03 0.877±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WT CIL_0007WT_0002 VISTA 19:10121785-10724671

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001778 IDA plasma membrane repair
GO:0005215 IEA transporter activity
GO:0005509 IEA calcium ion binding
GO:0005764 IDA lysosome
GO:0005886 IEA plasma membrane
GO:0006887 IEA exocytosis
GO:0008021 IEA synaptic vesicle
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0017158 IEA regulation of calcium ion-dependent exocytosis
GO:0030054 IEA cell junction
GO:0031045 IEA dense core granule
GO:0045956 IEA positive regulation of calcium ion-dependent exocytosis
GO:0046872 IEA metal ion binding
GO:0050796 IEA regulation of insulin secretion
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000063568 SYT7 (1 of 2) synaptotagmin VII protein_coding Danio_rerio
ENSDARG00000078060 syt7b synaptotagmin VIIb protein_coding Danio_rerio
ENSG00000011347 SYT7 synaptotagmin VII protein_coding Homo_sapiens

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