C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: exostosin-like glycosyltransferase 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000012232 EXTL3 9606 + 8:28600469-28755599 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000220562 EXTL3-001 28701327-28753687 protein_coding
  ENST00000454906 EXTL3-006 28631432-28715610 processed_transcript
  ENST00000517738 EXTL3-012 28730160-28750724 protein_coding
  ENST00000518223 EXTL3-008 28710355-28715903 processed_transcript
  ENST00000519288 EXTL3-003 28622761-28715786 processed_transcript
  ENST00000519886 EXTL3-010 28701605-28752832 processed_transcript
  ENST00000520679 EXTL3-013 28743976-28751094 processed_transcript
  ENST00000520940 EXTL3-005 28631406-28713513 processed_transcript
  ENST00000521473 EXTL3-014 28718060-28750836 protein_coding
  ENST00000521532 EXTL3-009 28710358-28743183 protein_coding
  ENST00000522698 EXTL3-011 28716685-28743164 nonsense_mediated_decay
  ENST00000522725 EXTL3-004 28600469-28715616 processed_transcript
  ENST00000523149 EXTL3-002 28622729-28750903 protein_coding
  ENST00000523271 EXTL3-007 28739901-28755599 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000220562ENST00000523271
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000220562 9.620±0.00 6.506±0.00 0.688±0.00 8.866±3.97 3.558±1.93 3.315±2.44 6.811±5.06 4.354±2.84 3.327±0.81 2.667±2.35 3.361±2.77 6.425±4.07 14.209±4.34 12.440±1.23
ENST00000523271 N/A N/A 0.220±0.00 N/A 0.274±0.00 N/A N/A N/A N/A 0.313±0.00 N/A 0.205±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000935 CIL_000935_0001 VISTA 8:28213350-28814343

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001888 IEA glucuronyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity
GO:0005783 IDA endoplasmic reticulum
GO:0005789 TAS endoplasmic reticulum membrane
GO:0006987 TAS activation of signaling protein activity involved in unfolded protein response
GO:0015012 IEA heparan sulfate proteoglycan biosynthetic process
GO:0016021 IEA integral component of membrane
GO:0016758 IEA transferase activity, transferring hexosyl groups
GO:0030307 IEA positive regulation of cell growth
GO:0030968 TAS endoplasmic reticulum unfolded protein response
GO:0031227 IEA intrinsic component of endoplasmic reticulum membrane
GO:0044267 TAS cellular protein metabolic process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000026811 extl3 exostoses (multiple)-like 3 protein_coding Danio_rerio
ENSMUSG00000021978 Extl3 exostoses (multiple)-like 3 protein_coding Mus_musculus

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