C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: exostoses (multiple)-like 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000026811 extl3 7955 - 20:50252671-50326789 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000039499 extl3-201 50252671-50273850 protein_coding
  ENSDART00000148892 extl3-001 50252671-50326789 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000039499ENSDART00000148892
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000039499 3.510±0.00 0.822±0.00 N/A 0.365±0.00 0.356±0.00
ENSDART00000148892 N/A 0.756±0.11 0.275±0.06 0.075±0.00 0.550±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000RT CIL_0000RT_0001 CGP 20:50206973-50326789

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001888 ISS glucuronyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity
GO:0015012 IEA heparan sulfate proteoglycan biosynthetic process
GO:0016021 IEA integral to membrane
GO:0016758 IEA transferase activity, transferring hexosyl groups
GO:0030516 IMP regulation of axon extension
GO:0031227 IEA intrinsic to endoplasmic reticulum membrane
GO:0031290 IMP retinal ganglion cell axon guidance
GO:0033339 IMP pectoral fin development
GO:0033564 IGI anterior/posterior axon guidance
GO:0035118 IMP embryonic pectoral fin morphogenesis
GO:0035138 IMP pectoral fin morphogenesis
GO:0045743 IMP positive regulation of fibroblast growth factor receptor signaling pathway
GO:0050650 IMP chondroitin sulfate proteoglycan biosynthetic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000012232 EXTL3 exostosin-like glycosyltransferase 3 protein_coding Homo_sapiens
ENSMUSG00000021978 Extl3 exostoses (multiple)-like 3 protein_coding Mus_musculus

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