C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: NudC domain containing 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000015676 NUDCD3 9606 - 7:44379121-44490880 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000338427 NUDCD3-009 44385814-44402923 processed_transcript
  ENST00000355451 NUDCD3-001 44379121-44490880 protein_coding
  ENST00000460110 NUDCD3-002 44383591-44481462 processed_transcript
  ENST00000464812 NUDCD3-003 44404513-44490606 retained_intron
  ENST00000472246 NUDCD3-006 44392385-44471960 processed_transcript
  ENST00000475952 NUDCD3-011 44385351-44392508 retained_intron
  ENST00000478769 NUDCD3-007 44425910-44427641 processed_transcript
  ENST00000480209 NUDCD3-005 44484444-44485274 processed_transcript
  ENST00000487118 NUDCD3-010 44383591-44402789 processed_transcript
  ENST00000493613 NUDCD3-008 44385893-44425950 processed_transcript
  ENST00000497978 NUDCD3-004 44485069-44490265 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000355451ENST00000460110ENST00000464812ENST00000472246ENST00000480209
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000355451 1.841±0.00 1.089±0.00 6.736±1.95 1.183±0.39 1.133±0.00 1.290±0.87 1.003±0.21 2.109±0.00 1.352±0.00 1.250±0.00 1.710±0.94 1.875±0.80 7.049±0.00
ENST00000460110 N/A 1.554±0.00 20.178±9.35 9.931±6.18 10.291±7.52 7.115±5.20 7.912±5.83 6.043±2.26 2.130±0.00 3.040±0.00 11.345±6.12 11.499±2.43 7.853±0.00
ENST00000464812 N/A N/A N/A 14.260±0.00 17.562±0.00 11.595±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000472246 N/A N/A N/A N/A N/A N/A N/A N/A 8.371±0.00 N/A N/A N/A N/A
ENST00000480209 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.885±0.00 21.722±0.00 45.537±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007BR CIL_0007BR_0002 CGP 7:44217150-44490880

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000006005 nudcd3 NudC domain containing 3 protein_coding Danio_rerio
ENSMUSG00000053838 Nudcd3 NudC domain containing 3 protein_coding Mus_musculus

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