C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007BR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000021065-ENSDARG00000006005 CGP 7955 10:46221688-46297986
GeneTranscriptPositionBiotype
ENSDARG00000006005 (nudcd3)
NudC domain containing 3 		ENSDART00000020817 (nudcd3-001) 46287506-46297986 protein_coding
ENSDARG00000021065 (camk2b2)
calcium/calmodulin-dependent protein kinase (CaM kinase) II beta 2 		ENSDART00000044837 (camk2b2-201) 46221688-46286085 protein_coding
ENSDART00000133694 (camk2b2-002) 46223112-46229313 protein_coding
ENSDART00000134906 (camk2b2-001) 46252307-46286085 protein_coding
CIL_0007BR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000058404-ENSG00000015676 CGP 9606 7:44217150-44490880
GeneTranscriptPositionBiotype
ENSG00000058404 (CAMK2B)
calcium/calmodulin-dependent protein kinase II beta 		ENST00000258682 (CAMK2B-026) 44219430-44325424 protein_coding
ENST00000346990 (CAMK2B-007) 44219430-44325424 protein_coding
ENST00000347193 (CAMK2B-005) 44219430-44325424 protein_coding
ENST00000350811 (CAMK2B-008) 44217150-44325496 protein_coding
ENST00000353185 (CAMK2B-009) 44219417-44325485 nonsense_mediated_decay
ENST00000353625 (CAMK2B-006) 44219351-44325431 protein_coding
ENST00000358707 (CAMK2B-004) 44219346-44325625 protein_coding
ENST00000395747 (CAMK2B-003) 44220062-44325421 protein_coding
ENST00000395749 (CAMK2B-002) 44217156-44325498 protein_coding
ENST00000415369 (CAMK2B-016) 44243470-44323962 protein_coding
ENST00000421607 (CAMK2B-020) 44244889-44325447 protein_coding
ENST00000424197 (CAMK2B-015) 44243473-44325474 protein_coding
ENST00000425809 (CAMK2B-022) 44219213-44225913 protein_coding
ENST00000427209 (CAMK2B-024) 44263005-44325519 processed_transcript
ENST00000433930 (CAMK2B-021) 44225835-44242306 protein_coding
ENST00000440254 (CAMK2B-001) 44219292-44325656 protein_coding
ENST00000457475 (CAMK2B-201) 44217150-44325631 protein_coding
ENST00000462128 (CAMK2B-018) 44247120-44268132 processed_transcript
ENST00000466584 (CAMK2B-023) 44219349-44220953 retained_intron
ENST00000470984 (CAMK2B-013) 44247129-44326167 processed_transcript
ENST00000484972 (CAMK2B-017) 44243485-44268825 processed_transcript
ENST00000489429 (CAMK2B-011) 44219365-44230347 processed_transcript
ENST00000495819 (CAMK2B-014) 44243456-44325190 processed_transcript
ENST00000497127 (CAMK2B-019) 44243251-44259581 processed_transcript
ENST00000497584 (CAMK2B-012) 44219351-44334577 processed_transcript
ENST00000523845 (CAMK2B-027) 44217559-44325475 nonsense_mediated_decay
ENSG00000146677 (AC004453.8)
 ENST00000487895 (AC004453.8-001) 44467897-44468304 processed_pseudogene
ENSG00000279853 (RP5-844F9.1)
 ENST00000624861 (RP5-844F9.1-001) 44367140-44369292 TEC
CIL_0007BR_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000057897-ENSMUSG00000053838 CGP 10090 11:5969644-6200415
GeneTranscriptPositionBiotype
ENSMUSG00000053838 (Nudcd3)
NudC domain containing 3 		ENSMUST00000066496 (Nudcd3-004) 6105691-6200415 protein_coding
ENSMUST00000109805 (Nudcd3-003) 6105986-6119409 protein_coding
ENSMUST00000135631 (Nudcd3-001) 6106458-6193476 protein_coding
ENSMUST00000140700 (Nudcd3-002) 6122925-6193476 processed_transcript
ENSMUSG00000057897 (Camk2b)
calcium/calmodulin-dependent protein kinase II, beta 		ENSMUST00000002817 (Camk2b-008) 5971672-6065742 protein_coding
ENSMUST00000019133 (Camk2b-009) 5971680-6065612 protein_coding
ENSMUST00000066431 (Camk2b-001) 5971672-6065545 protein_coding
ENSMUST00000090443 (Camk2b-201) 5969672-6065748 protein_coding
ENSMUST00000093355 (Camk2b-002) 5971669-6065582 protein_coding
ENSMUST00000101585 (Camk2b-004) 5971735-6065538 protein_coding
ENSMUST00000101586 (Camk2b-011) 5972217-6065570 protein_coding
ENSMUST00000109812 (Camk2b-010) 5971568-6065563 protein_coding
ENSMUST00000109813 (Camk2b-003) 5969644-6065748 protein_coding
ENSMUST00000109815 (Camk2b-202) 5969672-6065563 protein_coding
ENSMUST00000123391 (Camk2b-007) 5992820-6066362 processed_transcript
ENSMUST00000129098 (Camk2b-006) 6011665-6065658 processed_transcript
ENSMUST00000130427 (Camk2b-012) 5990395-6000448 processed_transcript
ENSMUST00000154197 (Camk2b-005) 5988101-6065538 processed_transcript
ENSMUST00000155755 (Camk2b-013) 5969668-5984138 processed_transcript
ENSMUSG00000083022 (Rps15a-ps6)
ribosomal protein S15A, pseudogene 6 		ENSMUST00000117476 (Rps15a-ps6-001) 6172644-6173036 processed_pseudogene
ENSMUSG00000083209 (Gm11969)
predicted gene 11969 		ENSMUST00000118848 (Gm11969-001) 6182679-6183034 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007BR_0001ENSDARG00000006005ENSDART00000020817ENSDARG00000021065ENSDART00000044837ENSDART00000133694ENSDART00000134906CIL_0007BR_0002ENSG00000058404ENST00000258682ENST00000346990ENST00000347193ENST00000350811ENST00000353185ENST00000353625ENST00000358707ENST00000395747ENST00000395749ENST00000415369ENST00000421607ENST00000424197ENST00000425809ENST00000427209ENST00000433930ENST00000440254ENST00000457475ENST00000462128ENST00000466584ENST00000470984ENST00000484972ENST00000489429ENST00000495819ENST00000497127ENST00000497584ENST00000523845ENSG00000146677ENST00000487895ENSG00000279853ENST00000624861CIL_0007BR_0003ENSMUSG00000053838ENSMUST00000066496ENSMUST00000109805ENSMUST00000135631ENSMUST00000140700ENSMUSG00000057897ENSMUST00000002817ENSMUST00000019133ENSMUST00000066431ENSMUST00000090443ENSMUST00000093355ENSMUST00000101585ENSMUST00000101586ENSMUST00000109812ENSMUST00000109813ENSMUST00000109815ENSMUST00000123391ENSMUST00000129098ENSMUST00000130427ENSMUST00000154197ENSMUST00000155755ENSMUSG00000083022ENSMUST00000117476ENSMUSG00000083209ENSMUST00000118848
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007BR_0001ENSDARG00000006005ENSDART00000020817ENSDARG00000021065ENSDART00000044837ENSDART00000133694ENSDART00000134906CIL_0007BR_0002ENSG00000058404ENST00000258682ENST00000350811ENST00000353625ENST00000358707ENST00000395747ENST00000395749ENST00000425809ENST00000440254ENST00000457475ENST00000466584ENST00000495819ENSG00000146677ENST00000487895ENSG00000279853ENST00000624861CIL_0007BR_0003ENSMUSG00000053838ENSMUST00000066496ENSMUST00000109805ENSMUST00000135631ENSMUSG00000057897ENSMUST00000002817ENSMUST00000019133ENSMUST00000066431ENSMUST00000090443ENSMUST00000093355ENSMUST00000101586ENSMUST00000109812ENSMUST00000109813ENSMUST00000109815ENSMUST00000129098ENSMUST00000155755ENSMUSG00000083022ENSMUST00000117476ENSMUSG00000083209ENSMUST00000118848
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000006005 ENSDART00000020817 N/A N/A N/A 14.763±15.10 N/A N/A 19.760±17.35 16.619±0.00 2.150±0.00 N/A 25.526±0.00 N/A N/A N/A
ENSDARG00000021065 ENSDART00000044837 N/A N/A N/A 8.321±8.62 N/A N/A 0.029±0.00 0.033±0.00 0.035±0.00 N/A 0.359±0.00 N/A N/A N/A
ENSDART00000133694 N/A N/A N/A N/A N/A N/A 0.129±0.07 N/A N/A N/A 0.759±0.00 N/A N/A N/A
ENSDART00000134906 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.601±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000058404 ENST00000258682 N/A N/A N/A N/A N/A N/A 2.749±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000346990 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000347193 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000350811 N/A N/A N/A 22.139±13.77 N/A N/A N/A N/A N/A N/A 4.377±0.00 N/A N/A N/A
ENST00000353185 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000353625 N/A N/A N/A N/A N/A N/A N/A N/A 0.078±0.00 N/A N/A N/A N/A N/A
ENST00000358707 N/A N/A 0.098±0.00 N/A N/A N/A N/A 0.748±0.00 N/A N/A N/A 0.105±0.00 N/A 0.694±0.00
ENST00000395747 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.507±0.00
ENST00000395749 0.040±0.00 0.317±0.00 N/A N/A N/A N/A 7.377±6.31 0.089±0.00 N/A N/A 20.772±20.09 0.102±0.00 N/A 0.360±0.00
ENST00000415369 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000421607 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000424197 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000425809 N/A N/A N/A N/A N/A N/A N/A N/A 0.607±0.00 N/A N/A 0.076±0.00 N/A N/A
ENST00000427209 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000433930 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000440254 N/A N/A N/A 13.705±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000457475 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.054±0.03 0.021±0.00 1.868±1.70
ENST00000462128 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466584 N/A N/A N/A N/A N/A 0.485±0.00 N/A N/A N/A N/A N/A 0.248±0.08 N/A N/A
ENST00000470984 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484972 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489429 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495819 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.380±0.00 N/A N/A
ENST00000497127 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497584 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523845 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000146677 ENST00000487895 0.373±0.00 0.986±0.00 0.169±0.00 0.186±0.04 0.553±0.00 0.472±0.00 0.335±0.26 0.183±0.00 0.377±0.22 0.175±0.00 1.724±0.00 1.296±0.00 0.220±0.00 0.273±0.04
ENSG00000279853 ENST00000624861 N/A 0.191±0.00 N/A 0.298±0.09 0.104±0.00 N/A 0.114±0.03 0.061±0.00 0.041±0.03 0.102±0.04 0.128±0.00 0.045±0.02 0.025±0.00 0.073±0.05
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000053838 ENSMUST00000066496 6.901±0.40 4.523±0.68 2.423±0.11 12.624±2.04 4.329±0.75 3.514±0.91 5.748±0.38 5.414±0.53 2.082±0.93 5.112±1.73 9.062±3.14 6.808±1.15 6.607±2.05 7.121±1.18
ENSMUST00000109805 14.612±0.89 21.723±1.68 15.606±2.36 23.385±3.12 19.911±3.78 10.244±2.49 18.212±0.65 15.594±0.90 7.151±1.76 20.715±2.04 9.313±2.71 18.028±4.78 8.671±2.11 5.733±1.44
ENSMUST00000135631 N/A N/A N/A 15.689±0.00 N/A 2.852±0.21 N/A N/A N/A N/A 3.520±0.00 4.410±0.16 2.813±0.37 7.241±0.00
ENSMUST00000140700 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000057897 ENSMUST00000002817 N/A 3.069±1.38 0.460±0.00 23.013±2.48 N/A 3.118±0.16 N/A N/A 0.207±0.00 1.770±0.00 N/A 0.868±0.35 0.143±0.00 0.511±0.02
ENSMUST00000019133 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.432±0.00 N/A N/A N/A
ENSMUST00000066431 1.044±0.00 N/A N/A N/A 1.217±0.42 6.162±0.74 N/A N/A 0.954±0.25 N/A N/A 1.560±0.29 N/A 0.801±0.17
ENSMUST00000090443 0.451±0.00 1.227±0.38 0.172±0.00 N/A N/A 2.141±0.48 0.835±0.00 0.407±0.06 0.290±0.18 0.860±0.00 N/A 0.400±0.00 N/A N/A
ENSMUST00000093355 N/A N/A N/A N/A 0.479±0.00 N/A N/A N/A N/A N/A N/A N/A 0.085±0.00 N/A
ENSMUST00000101585 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000101586 N/A N/A N/A N/A 2.260±0.00 N/A N/A N/A 0.515±0.00 N/A N/A N/A N/A N/A
ENSMUST00000109812 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.387±0.00
ENSMUST00000109813 N/A 2.008±0.57 0.208±0.04 13.522±2.84 4.142±2.54 N/A 1.415±0.52 0.809±0.09 0.063±0.00 N/A 11.317±2.70 0.445±0.22 0.037±0.00 N/A
ENSMUST00000109815 N/A N/A N/A 317.752±0.00 N/A N/A N/A N/A 0.623±0.39 N/A N/A N/A N/A N/A
ENSMUST00000123391 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129098 N/A N/A N/A N/A 0.242±0.00 N/A N/A 0.282±0.02 N/A N/A N/A 0.368±0.11 N/A N/A
ENSMUST00000130427 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154197 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155755 N/A 4.140±0.82 0.515±0.24 N/A 0.644±0.22 6.880±2.44 N/A N/A 0.143±0.00 N/A N/A 0.634±0.11 0.049±0.00 0.619±0.28
ENSMUSG00000083022 ENSMUST00000117476 0.443±0.21 0.433±0.00 13.589±12.71 2.337±0.04 0.440±0.20 0.935±0.53 0.820±0.51 1.417±0.61 13.326±31.41 0.511±0.14 1.322±0.98 0.675±0.26 0.322±0.14 1.582±0.75
ENSMUSG00000083209 ENSMUST00000118848 0.457±0.25 0.326±0.00 0.229±0.02 0.386±0.03 0.774±0.49 0.807±0.28 0.283±0.14 0.292±0.11 0.164±0.11 0.491±0.30 N/A 1.705±0.97 0.372±0.17 0.243±0.08

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