C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: pleckstrin homology-like domain, family B, member 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000019144 PHLDB1 9606 + 11:118606440-118658038 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000356063 PHLDB1-020 118607643-118658025 protein_coding
  ENST00000361417 PHLDB1-001 118606440-118658031 protein_coding
  ENST00000392852 PHLDB1-021 118639407-118645783 retained_intron
  ENST00000524713 PHLDB1-038 118641577-118656841 processed_transcript
  ENST00000525226 PHLDB1-008 118644369-118650521 retained_intron
  ENST00000525427 PHLDB1-004 118613153-118615194 retained_intron
  ENST00000526374 PHLDB1-013 118621363-118627593 processed_transcript
  ENST00000526537 PHLDB1-025 118646334-118657152 retained_intron
  ENST00000526699 PHLDB1-017 118634978-118639355 retained_intron
  ENST00000526826 PHLDB1-024 118642351-118644302 retained_intron
  ENST00000527259 PHLDB1-012 118615585-118627464 processed_transcript
  ENST00000527500 PHLDB1-040 118635024-118639237 processed_transcript
  ENST00000527898 PHLDB1-009 118631916-118658025 processed_transcript
  ENST00000528594 PHLDB1-003 118607616-118658028 nonsense_mediated_decay
  ENST00000528875 PHLDB1-018 118635029-118650127 processed_transcript
  ENST00000529005 PHLDB1-026 118644089-118647837 processed_transcript
  ENST00000530708 PHLDB1-201 118613837-118627569 protein_coding
  ENST00000530994 PHLDB1-002 118607615-118658028 nonsense_mediated_decay
  ENST00000531987 PHLDB1-011 118642039-118644565 retained_intron
  ENST00000532517 PHLDB1-010 118626930-118658025 retained_intron
  ENST00000532639 PHLDB1-039 118610427-118627396 protein_coding
  ENST00000534140 PHLDB1-019 118631976-118658025 protein_coding
  ENST00000600882 PHLDB1-202 118607591-118658038 protein_coding
  ENST00000601898 PHLDB1-203 118631460-118658026 protein_coding
  ENST00000612681 PHLDB1-016 118632213-118643940 retained_intron
  ENST00000614369 PHLDB1-007 118629979-118658028 processed_transcript
  ENST00000617208 PHLDB1-014 118624084-118625059 processed_transcript
  ENST00000620788 PHLDB1-031 118650601-118657490 retained_intron
  ENST00000621027 PHLDB1-006 118607633-118632037 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000356063ENST00000524713ENST00000526537ENST00000532517ENST00000600882ENST00000601898ENST00000612681ENST00000614369ENST00000620788
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000356063 N/A N/A 14.211±0.00 4.203±0.00 N/A 5.466±2.18 0.779±0.00 2.651±0.00 5.758±2.39 4.016±1.78 4.615±1.47 6.214±1.46 5.674±0.00
ENST00000524713 N/A N/A 56.536±0.00 7.660±0.00 16.205±0.00 N/A N/A N/A N/A 6.715±0.00 27.920±4.43 24.889±0.00 21.875±3.14
ENST00000526537 N/A 1.875±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532517 N/A N/A N/A 2.704±0.00 N/A N/A N/A 2.414±0.00 N/A N/A N/A N/A N/A
ENST00000600882 N/A N/A 12.636±8.29 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601898 N/A N/A N/A N/A N/A N/A N/A 1.255±0.00 N/A N/A N/A N/A N/A
ENST00000612681 3.886±0.00 N/A N/A N/A 3.784±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000614369 N/A 1.292±0.00 N/A N/A N/A N/A N/A N/A N/A 0.928±0.00 N/A N/A N/A
ENST00000620788 N/A 0.833±0.00 N/A 1.642±0.00 N/A N/A N/A 1.005±0.77 0.837±0.00 0.456±0.00 1.176±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081E CIL_00081E_0001 VISTA 11:118137591-118740525

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061093 phldb1a pleckstrin homology-like domain, family B, member 1a protein_coding Danio_rerio
ENSDARG00000079378 phldb1b pleckstrin homology-like domain, family B, member 1b protein_coding Danio_rerio
ENSMUSG00000048537 Phldb1 pleckstrin homology-like domain, family B, member 1 protein_coding Mus_musculus

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