C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: pleckstrin homology-like domain, family B, member 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000048537 Phldb1 10090 - 9:44686304-44735198 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000034611 Phldb1-001 44686308-44735198 protein_coding
  ENSMUST00000123003 Phldb1-011 44726010-44726486 processed_transcript
  ENSMUST00000123123 Phldb1-015 44703573-44708427 nonsense_mediated_decay
  ENSMUST00000123310 Phldb1-016 44697734-44704108 protein_coding
  ENSMUST00000123406 Phldb1-012 44716124-44721424 protein_coding
  ENSMUST00000126818 Phldb1-010 44718332-44727350 retained_intron
  ENSMUST00000128326 Phldb1-005 44686308-44715623 protein_coding
  ENSMUST00000129806 Phldb1-017 44687634-44697845 retained_intron
  ENSMUST00000133312 Phldb1-018 44694464-44696431 retained_intron
  ENSMUST00000134465 Phldb1-007 44686310-44728100 protein_coding
  ENSMUST00000135436 Phldb1-003 44686310-44701733 protein_coding
  ENSMUST00000138356 Phldb1-002 44686308-44728079 protein_coding
  ENSMUST00000144251 Phldb1-004 44686308-44713240 protein_coding
  ENSMUST00000147495 Phldb1-006 44686304-44728100 protein_coding
  ENSMUST00000148344 Phldb1-008 44686310-44716380 protein_coding
  ENSMUST00000148929 Phldb1-013 44716294-44721387 protein_coding
  ENSMUST00000154723 Phldb1-014 44700962-44710946 protein_coding
  ENSMUST00000156918 Phldb1-009 44686308-44713265 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034611ENSMUST00000123310ENSMUST00000128326ENSMUST00000134465ENSMUST00000135436ENSMUST00000138356ENSMUST00000144251ENSMUST00000147495ENSMUST00000148344ENSMUST00000156918
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034611 10.032±0.31 N/A 7.202±0.66 5.919±0.11 5.620±0.00 N/A N/A 2.729±0.00 0.556±0.00 8.229±0.84 1.159±0.00 6.644±2.65 1.447±0.06 0.266±0.09
ENSMUST00000123310 N/A N/A N/A N/A N/A 29.946±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128326 N/A N/A 5.149±0.07 16.650±0.00 N/A N/A N/A N/A N/A N/A 1.818±0.41 14.272±0.00 21.599±6.55 0.144±0.00
ENSMUST00000134465 18.426±4.47 10.795±2.33 5.813±0.31 N/A 19.627±11.20 9.648±1.47 5.545±0.00 6.181±2.83 0.397±0.15 15.739±1.31 1.811±0.57 13.888±5.90 10.864±4.11 0.339±0.22
ENSMUST00000135436 N/A N/A N/A 18.810±0.00 N/A N/A 14.974±1.94 N/A 0.375±0.04 N/A 2.096±0.30 8.027±0.60 N/A 0.262±0.00
ENSMUST00000138356 N/A N/A N/A 6.196±0.00 N/A N/A N/A N/A N/A N/A 1.462±0.43 N/A N/A 0.071±0.00
ENSMUST00000144251 N/A N/A 6.933±1.80 9.147±0.00 N/A 13.363±3.16 N/A 4.313±0.00 0.347±0.00 N/A N/A N/A 3.608±1.74 N/A
ENSMUST00000147495 N/A N/A N/A 4.806±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148344 N/A N/A N/A N/A N/A N/A 9.809±0.49 N/A N/A N/A 1.791±0.51 N/A N/A N/A
ENSMUST00000156918 N/A N/A 5.905±0.00 N/A N/A 10.054±2.39 N/A N/A 0.607±0.18 N/A N/A N/A 8.069±6.83 0.102±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081E CIL_00081E_0002 VISTA 9:44577224-45180192
CIL_0003MD CIL_0003MD_0003 CGP 9:44686304-44767845

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061093 phldb1a pleckstrin homology-like domain, family B, member 1a protein_coding Danio_rerio
ENSDARG00000079378 phldb1b pleckstrin homology-like domain, family B, member 1b protein_coding Danio_rerio
ENSG00000019144 PHLDB1 pleckstrin homology-like domain, family B, member 1 protein_coding Homo_sapiens

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