C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transcription factor B1, mitochondrial
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000029639 TFB1M 9606 - 6:155257509-155314493 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000367166 TFB1M-001 155257509-155314484 protein_coding
  ENST00000466349 TFB1M-006 155311177-155314427 processed_transcript
  ENST00000468889 TFB1M-002 155257653-155297069 processed_transcript
  ENST00000470239 TFB1M-004 155257673-155314484 processed_transcript
  ENST00000475849 TFB1M-003 155297081-155314493 processed_transcript
  ENST00000480390 TFB1M-005 155310846-155314450 processed_transcript
  ENST00000487586 TFB1M-007 155296961-155303498 processed_transcript
  ENST00000489874 TFB1M-008 155260823-155299542 processed_transcript
  ENST00000495806 TFB1M-009 155257977-155285199 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyLiverOvaryTestisENST00000367166
Transcript ID Heart Kidney Liver Ovary Testis
ENST00000367166 4.695±0.00 2.911±0.00 2.679±0.00 33.583±0.00 36.148±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00055J CIL_00055J_0001 CGP 6:154733325-155257723
CIL_00055I CIL_00055I_0001 CGP 6:154832697-155314493
CIL_0002QM CIL_0002QM_0002 CGP 6:155257509-155314493

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000154 IEA rRNA modification
GO:0000179 IEA rRNA (adenine-N6,N6-)-dimethyltransferase activity
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005739 IEA mitochondrion
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008649 IEA rRNA methyltransferase activity
GO:0031167 IEA rRNA methylation
GO:0042645 IDA mitochondrial nucleoid
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000040727 tfb1m transcription factor B1, mitochondrial protein_coding Danio_rerio
ENSMUSG00000036983 Tfb1m transcription factor B1, mitochondrial protein_coding Mus_musculus

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