C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00055I_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000146426-ENSG00000029639 CGP 9606 6:154832697-155314493
GeneTranscriptPositionBiotype
ENSG00000029639 (TFB1M)
transcription factor B1, mitochondrial 		ENST00000367166 (TFB1M-001) 155257509-155314484 protein_coding
ENST00000466349 (TFB1M-006) 155311177-155314427 processed_transcript
ENST00000468889 (TFB1M-002) 155257653-155297069 processed_transcript
ENST00000470239 (TFB1M-004) 155257673-155314484 processed_transcript
ENST00000475849 (TFB1M-003) 155297081-155314493 processed_transcript
ENST00000480390 (TFB1M-005) 155310846-155314450 processed_transcript
ENST00000487586 (TFB1M-007) 155296961-155303498 processed_transcript
ENST00000489874 (TFB1M-008) 155260823-155299542 processed_transcript
ENST00000495806 (TFB1M-009) 155257977-155285199 processed_transcript
ENSG00000171217 (CLDN20)
claudin 20 		ENST00000367165 (CLDN20-001) 155264013-155276548 protein_coding
ENSG00000213079 (SCAF8)
SR-related CTD-associated factor 8 		ENST00000367178 (SCAF8-001) 154733325-154834060 protein_coding
ENST00000367186 (SCAF8-201) 154733378-154834244 protein_coding
ENST00000417268 (SCAF8-202) 154733378-154834244 protein_coding
ENST00000461219 (SCAF8-002) 154733378-154792946 processed_transcript
ENST00000464628 (SCAF8-003) 154733853-154792858 processed_transcript
ENST00000479234 (SCAF8-004) 154822162-154824942 processed_transcript
ENSG00000218757 (RP3-472M2.2)
 ENST00000404382 (RP3-472M2.2-001) 154845074-154845620 processed_pseudogene
ENSG00000238963 (U8)
U8 small nucleolar RNA 		ENST00000459445 (U8.1-220) 154905076-154905206 snoRNA
ENSG00000274451 (RP1-66H9.1)
 ENST00000622221 (RP1-66H9.1-001) 155004835-155005318 unprocessed_pseudogene
CIL_00055I_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000023800-ENSMUSG00000036983 CGP 10090 17:3326573-3557713
GeneTranscriptPositionBiotype
ENSMUSG00000023800 (Tiam2)
T cell lymphoma invasion and metastasis 2 		ENSMUST00000072156 (Tiam2-201) 3397207-3519397 protein_coding
ENSMUST00000169838 (Tiam2-202) 3326573-3519397 protein_coding
ENSMUSG00000036983 (Tfb1m)
transcription factor B1, mitochondrial 		ENSMUST00000041003 (Tfb1m-201) 3519263-3557713 protein_coding
ENSMUSG00000091530 (Cldn20)
claudin 20 		ENSMUST00000168560 (Cldn20-201) 3532554-3533213 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00055I_0001ENSG00000029639ENST00000367166ENST00000466349ENST00000468889ENST00000470239ENST00000475849ENST00000480390ENST00000487586ENST00000489874ENST00000495806ENSG00000171217ENST00000367165ENSG00000213079ENST00000367178ENST00000367186ENST00000417268ENST00000461219ENST00000464628ENST00000479234ENSG00000218757ENST00000404382ENSG00000238963ENST00000459445ENSG00000274451ENST00000622221CIL_00055I_0002ENSMUSG00000023800ENSMUST00000072156ENSMUST00000169838ENSMUSG00000036983ENSMUST00000041003ENSMUSG00000091530ENSMUST00000168560
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00055I_0001ENSG00000029639ENST00000367166ENSG00000171217ENST00000367165ENSG00000213079ENST00000367178ENST00000417268ENSG00000218757ENST00000404382ENSG00000238963ENST00000459445ENSG00000274451ENST00000622221CIL_00055I_0002ENSMUSG00000023800ENSMUST00000072156ENSMUST00000169838ENSMUSG00000036983ENSMUST00000041003ENSMUSG00000091530ENSMUST00000168560
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000029639 ENST00000367166 N/A N/A N/A N/A N/A N/A 4.695±0.00 2.911±0.00 2.679±0.00 N/A N/A 33.583±0.00 N/A 36.148±0.00
ENST00000466349 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468889 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470239 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475849 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480390 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487586 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489874 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495806 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000171217 ENST00000367165 0.120±0.00 0.189±0.00 N/A 0.350±0.23 0.226±0.20 0.160±0.14 0.159±0.13 0.990±0.63 0.231±0.19 0.039±0.00 0.224±0.00 0.315±0.22 0.116±0.06 0.163±0.09
ENSG00000213079 ENST00000367178 9.033±0.00 15.792±0.00 6.352±0.00 9.236±1.37 7.394±0.44 9.080±2.37 4.935±0.66 3.607±0.00 6.201±3.67 5.783±4.22 4.933±0.87 20.037±4.47 4.446±0.86 23.962±0.73
ENST00000367186 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000417268 N/A N/A N/A N/A 1.879±0.00 N/A N/A N/A 0.824±0.00 N/A 1.790±0.00 N/A 2.234±0.40 N/A
ENST00000461219 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464628 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479234 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000218757 ENST00000404382 N/A 0.168±0.00 0.371±0.00 0.089±0.00 0.862±0.65 1.736±0.00 0.101±0.06 0.953±0.00 1.576±0.00 1.886±0.00 N/A 0.566±0.50 N/A N/A
ENSG00000238963 ENST00000459445 N/A N/A N/A N/A N/A N/A 0.102±0.00 N/A N/A N/A N/A 0.571±0.00 0.626±0.00 N/A
ENSG00000274451 ENST00000622221 N/A 0.062±0.00 N/A N/A N/A N/A N/A N/A N/A 0.164±0.00 N/A 0.287±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000023800 ENSMUST00000072156 0.337±0.00 1.884±0.46 N/A 1.256±0.00 0.382±0.14 0.482±0.00 0.346±0.10 0.223±0.13 0.279±0.03 N/A 0.448±0.23 1.212±0.89 N/A N/A
ENSMUST00000169838 1.710±0.98 1.407±0.42 2.357±0.37 8.883±3.53 0.350±0.14 1.275±0.40 N/A 0.241±0.07 0.297±0.08 0.348±0.19 N/A 2.099±0.87 1.788±0.90 N/A
ENSMUSG00000036983 ENSMUST00000041003 2.199±0.66 N/A 5.427±0.95 5.783±0.00 1.606±0.97 1.657±0.00 2.757±0.41 2.531±0.22 5.877±3.99 1.297±0.09 3.565±0.39 4.929±1.91 3.799±1.85 15.381±5.30
ENSMUSG00000091530 ENSMUST00000168560 0.339±0.17 0.770±0.17 0.459±0.00 0.586±0.21 0.235±0.13 0.601±0.25 0.604±0.25 0.287±0.14 0.327±0.15 0.637±0.40 0.123±0.04 0.735±0.39 0.213±0.03 1.666±0.10

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