C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SH3 and SYLF domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000035115 SH3YL1 9606 - 2:217730-266398 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000356150 SH3YL1-001 218158-264065 protein_coding
  ENST00000402632 SH3YL1-004 239561-264810 protein_coding
  ENST00000403657 SH3YL1-011 218151-261323 protein_coding
  ENST00000403658 SH3YL1-005 218666-264810 protein_coding
  ENST00000403712 SH3YL1-002 218136-264032 protein_coding
  ENST00000405430 SH3YL1-003 218153-264179 protein_coding
  ENST00000415368 SH3YL1-016 249805-264810 protein_coding
  ENST00000431160 SH3YL1-019 229894-253113 protein_coding
  ENST00000451005 SH3YL1-020 218797-253041 protein_coding
  ENST00000454318 SH3YL1-023 233169-264824 protein_coding
  ENST00000460974 SH3YL1-026 217730-218866 processed_transcript
  ENST00000462719 SH3YL1-012 260257-266398 processed_transcript
  ENST00000463865 SH3YL1-007 218149-264392 processed_transcript
  ENST00000465733 SH3YL1-015 260343-264810 processed_transcript
  ENST00000468321 SH3YL1-006 218773-264743 processed_transcript
  ENST00000471948 SH3YL1-010 230378-263983 retained_intron
  ENST00000472012 SH3YL1-018 222361-231159 processed_transcript
  ENST00000472861 SH3YL1-013 260804-264810 processed_transcript
  ENST00000473104 SH3YL1-008 218153-262786 processed_transcript
  ENST00000475027 SH3YL1-024 233123-264810 processed_transcript
  ENST00000477707 SH3YL1-014 260512-264810 processed_transcript
  ENST00000479739 SH3YL1-009 218780-260708 nonsense_mediated_decay
  ENST00000481932 SH3YL1-021 230379-234231 protein_coding
  ENST00000488044 SH3YL1-022 231137-264866 processed_transcript
  ENST00000488979 SH3YL1-017 233119-264568 processed_transcript
  ENST00000497051 SH3YL1-025 232915-249770 retained_intron
  ENST00000602998 SH3YL1-027 255876-256377 processed_transcript
  ENST00000605370 SH3YL1-028 259423-260292 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000356150ENST00000403712
Transcript ID Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000356150 N/A N/A 5.990±0.00 N/A 11.222±0.00 5.844±0.00 7.324±0.00 N/A N/A N/A
ENST00000403712 5.014±0.00 9.461±0.00 5.394±0.45 6.380±0.71 15.562±0.00 N/A 7.381±1.00 11.201±1.75 6.037±1.33 10.591±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0006661 IEA phosphatidylinositol biosynthetic process
GO:0019902 IDA phosphatase binding
GO:0032587 IDA ruffle membrane
GO:0035091 IDA phosphatidylinositol binding
GO:1900027 IEA regulation of ruffle assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074393 sh3yl1 SH3 domain containing, Ysc84-like 1 (S. cerevisiae) protein_coding Danio_rerio
ENSMUSG00000020669 Sh3yl1 Sh3 domain YSC-like 1 protein_coding Mus_musculus

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