C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ubiquitin specific peptidase 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000036672 USP2 9606 - 11:119355215-119381726 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000260187 USP2-001 119355216-119381726 protein_coding
  ENST00000455332 USP2-002 119355215-119381711 protein_coding
  ENST00000525189 USP2-007 119358035-119360214 retained_intron
  ENST00000525735 USP2-003 119356534-119364207 protein_coding
  ENST00000527843 USP2-004 119373068-119379115 protein_coding
  ENST00000531070 USP2-005 119372978-119376356 protein_coding
  ENST00000532613 USP2-008 119358665-119363914 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000260187ENST00000455332ENST00000525189ENST00000525735ENST00000532613
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000260187 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.460±0.36 N/A 11.234±4.17
ENST00000455332 N/A N/A 5.845±4.50 2.227±0.00 N/A N/A N/A 0.040±0.00 N/A N/A 0.672±0.44 0.596±0.00 23.919±11.11
ENST00000525189 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.507±0.00 N/A 33.256±0.00
ENST00000525735 0.389±0.00 1.137±0.00 4.743±4.17 N/A 0.964±0.00 1.291±0.00 0.300±0.00 0.412±0.00 N/A N/A 2.085±1.22 N/A 18.363±3.43
ENST00000532613 N/A 6.216±0.00 N/A N/A 2.102±0.00 3.664±0.00 0.736±0.00 N/A 1.863±0.00 15.147±0.00 N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IMP negative regulation of transcription from RNA polymerase II promoter
GO:0004197 TAS cysteine-type endopeptidase activity
GO:0004221 IDA ubiquitin thiolesterase activity
GO:0004843 IDA ubiquitin-specific protease activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005813 IEA centrosome
GO:0005938 IEA cell cortex
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0007049 IEA cell cycle
GO:0007517 IEA muscle organ development
GO:0016579 IDA protein deubiquitination
GO:0030332 IPI cyclin binding
GO:0031625 IPI ubiquitin protein ligase binding
GO:0036459 IEA ubiquitinyl hydrolase activity
GO:0042802 IEA identical protein binding
GO:0045931 IMP positive regulation of mitotic cell cycle
GO:0046872 IEA metal ion binding
GO:0048471 IEA perinuclear region of cytoplasm
GO:0048642 IEA negative regulation of skeletal muscle tissue development
GO:0048643 IEA positive regulation of skeletal muscle tissue development
GO:0050821 IDA protein stabilization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020107 usp2a ubiquitin specific peptidase 2a protein_coding Danio_rerio
ENSMUSG00000032010 Usp2 ubiquitin specific peptidase 2 protein_coding Mus_musculus

Loading