C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin specific peptidase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000260187 USP2-001 ENSG00000036672 9606 - 11:119355216-119381726 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryTestisENST00000260187
Transcript ID Ovary Testis
ENST00000260187 0.460±0.36 11.234±4.17

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IMP negative regulation of transcription from RNA polymerase II promoter
GO:0004197 TAS cysteine-type endopeptidase activity
GO:0004221 IDA ubiquitin thiolesterase activity
GO:0004843 IDA ubiquitin-specific protease activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005813 IEA centrosome
GO:0005938 IEA cell cortex
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0007049 IEA cell cycle
GO:0007517 IEA muscle organ development
GO:0016579 IDA protein deubiquitination
GO:0030332 IPI cyclin binding
GO:0031625 IPI ubiquitin protein ligase binding
GO:0036459 IEA ubiquitinyl hydrolase activity
GO:0042802 IEA identical protein binding
GO:0045931 IMP positive regulation of mitotic cell cycle
GO:0046872 IEA metal ion binding
GO:0048471 IEA perinuclear region of cytoplasm
GO:0048642 IEA negative regulation of skeletal muscle tissue development
GO:0048643 IEA positive regulation of skeletal muscle tissue development
GO:0050821 IDA protein stabilization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114830 Usp2-004 protein_coding Mus_musculus 0 1615
ENSMUST00000034508 Usp2-001 protein_coding Mus_musculus 0 1615
ENSMUST00000177054 Usp2-003 protein_coding Mus_musculus 0 1609
ENSMUST00000065461 Usp2-005 protein_coding Mus_musculus 0 1341
ENSMUST00000176416 Usp2-006 protein_coding Mus_musculus 0 1327
ENSMUST00000175816 Usp2-008 nonsense_mediated_decay Mus_musculus 0 784
ENSMUST00000176671 Usp2-007 protein_coding Mus_musculus 0 617
ENSMUST00000177422 Usp2-009 processed_transcript Mus_musculus 0 586
ENSMUST00000176022 Usp2-010 processed_transcript Mus_musculus 0 479
ENSMUST00000185479 Rnf26-201 protein_coding Mus_musculus 0 311
ENSMUST00000162126 Rnf26-002 nonsense_mediated_decay Mus_musculus 0 311

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