C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribosomal protein L26-like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000037241 RPL26L1 9606 + 5:172958729-172969771 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000265100 RPL26L1-001 172959424-172969771 protein_coding
  ENST00000519156 RPL26L1-005 172959765-172969487 protein_coding
  ENST00000519239 RPL26L1-004 172959460-172969718 protein_coding
  ENST00000519522 RPL26L1-006 172959520-172959989 protein_coding
  ENST00000519974 RPL26L1-002 172958729-172969716 protein_coding
  ENST00000521476 RPL26L1-003 172958893-172969721 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000265100ENST00000519156ENST00000519239ENST00000519974ENST00000521476
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000265100 1.518±0.00 2.832±0.00 1.839±0.00 5.443±3.89 3.096±0.06 2.296±1.26 2.001±0.48 2.494±0.20 N/A 2.341±1.62 2.968±1.05 3.525±2.54 5.521±1.53 8.533±0.00
ENST00000519156 2.548±0.00 7.190±0.00 N/A 4.182±0.00 3.537±0.42 2.961±0.13 5.804±0.00 5.086±3.69 11.597±0.00 8.320±0.00 3.001±0.00 3.613±1.91 4.453±0.24 22.410±0.00
ENST00000519239 0.871±0.00 1.959±0.00 0.389±0.00 1.548±0.07 N/A N/A N/A 4.486±0.00 3.268±2.53 N/A N/A 7.906±8.32 10.571±8.06 45.328±38.36
ENST00000519974 N/A N/A N/A N/A N/A 1.178±0.00 N/A N/A N/A 1.131±0.00 N/A N/A 2.519±0.00 N/A
ENST00000521476 N/A N/A N/A N/A N/A N/A 1.295±0.00 0.378±0.00 N/A N/A N/A 0.753±0.00 1.547±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008KN CIL_0008KN_0001 VISTA 5:172471670-173074006
CIL_000915 CIL_000915_0001 VISTA 5:172905793-173506594

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000184 TAS nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003735 IEA structural constituent of ribosome
GO:0005829 TAS cytosol
GO:0006412 IEA:TAS translation
GO:0006413 TAS translational initiation
GO:0006414 TAS translational elongation
GO:0006415 TAS translational termination
GO:0006614 TAS SRP-dependent cotranslational protein targeting to membrane
GO:0010467 TAS gene expression
GO:0015934 IEA large ribosomal subunit
GO:0016032 TAS viral process
GO:0016070 TAS RNA metabolic process
GO:0016071 TAS mRNA metabolic process
GO:0019058 TAS viral life cycle
GO:0019083 TAS viral transcription
GO:0044267 TAS cellular protein metabolic process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039641 rpl26 ribosomal protein L26 protein_coding Danio_rerio

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