C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: bestrophin 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000039987 BEST2 9606 + 19:12751702-12758458 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000042931 BEST2-201 12752593-12758455 protein_coding
  ENST00000549706 BEST2-002 12751702-12758406 protein_coding
  ENST00000552539 BEST2-003 12755859-12756706 protein_coding
  ENST00000553030 BEST2-001 12751802-12758458 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000042931ENST00000552539ENST00000553030
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000042931 0.014±0.00 N/A N/A 0.461±0.43 5.637±3.52 N/A N/A N/A N/A 0.841±0.00 0.042±0.00 0.080±0.00 0.277±0.07
ENST00000552539 0.089±0.00 0.354±0.00 0.330±0.00 0.209±0.00 0.468±0.00 0.062±0.00 0.276±0.00 0.061±0.00 0.652±0.00 N/A N/A 0.087±0.00 0.141±0.05
ENST00000553030 N/A N/A N/A N/A 5.108±0.00 N/A N/A N/A N/A N/A N/A 0.136±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00016W CIL_00016W_0002 CGP 19:12737139-12758458

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005254 ISS chloride channel activity
GO:0005886 IEA plasma membrane
GO:0005929 ISS cilium
GO:0006821 IEA chloride transport
GO:0007608 ISS sensory perception of smell
GO:0008150 ND biological_process
GO:0034707 IEA chloride channel complex
GO:0051899 ISS membrane depolarization
GO:1902476 ISS chloride transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079163 best2 bestrophin 2 protein_coding Danio_rerio
ENSMUSG00000052819 Best2 bestrophin 2 protein_coding Mus_musculus

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