C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: bestrophin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000042931 BEST2-201 ENSG00000039987 9606 + 19:12752593-12758455 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonMuscleOvaryPlacentaTestisENST00000042931
Transcript ID Adipose Breast Colon Muscle Ovary Placenta Testis
ENST00000042931 0.014±0.00 0.461±0.43 5.637±3.52 0.841±0.00 0.042±0.00 0.080±0.00 0.277±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00016W CIL_00016W_0002 CGP 19:12737139-12758458

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005254 ISS chloride channel activity
GO:0005886 IEA plasma membrane
GO:0005929 ISS cilium
GO:0007608 ISS sensory perception of smell
GO:0008150 ND biological_process
GO:0034707 IEA chloride channel complex
GO:0051899 ISS membrane depolarization
GO:1902476 ISS chloride transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000059072 Best2-201 protein_coding Mus_musculus 0 1389

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