C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: BARX homeobox 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000043039 BARX2 9606 + 11:129375940-129452279 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000281437 BARX2-001 129375940-129452279 protein_coding
  ENST00000605151 BARX2-002 129436174-129438321 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000281437ENST00000605151
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000281437 0.097±0.00 1.552±0.00 1.060±0.00 0.439±0.34 7.638±7.06 0.893±0.20 N/A 3.891±0.00 N/A 0.348±0.13 5.121±5.73 4.293±2.50 4.702±1.18
ENST00000605151 0.030±0.00 0.196±0.00 N/A N/A N/A 0.144±0.00 0.029±0.00 N/A 0.062±0.00 N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0000977 IMP RNA polymerase II regulatory region sequence-specific DNA binding
GO:0001228 IMP RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0001502 IEA cartilage condensation
GO:0003677 IDA:IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005667 IEA transcription factor complex
GO:0005739 IDA mitochondrion
GO:0006351 IEA transcription, DNA-templated
GO:0014902 IEA myotube differentiation
GO:0043565 IEA sequence-specific DNA binding
GO:0045944 IMP positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041098 barx2 BarH-like homeobox 2 protein_coding Danio_rerio
ENSMUSG00000032033 Barx2 BarH-like homeobox 2 protein_coding Mus_musculus

Loading