C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: BarH-like homeobox 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032033 Barx2 10090 - 9:31846044-31913462 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000116615 Barx2-001 31846044-31913462 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000116615
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000116615 2.362±1.66 0.024±0.01 0.350±0.04 0.884±0.96 4.807±2.28 1.578±0.21 0.026±0.01 0.061±0.03 0.030±0.05 5.064±3.41 2.722±1.13 9.059±2.58 0.625±0.37 0.089±0.03

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0000977 IEA RNA polymerase II regulatory region sequence-specific DNA binding
GO:0001228 IEA RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0001502 IDA cartilage condensation
GO:0003677 IGI DNA binding
GO:0003682 IDA chromatin binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005667 IDA transcription factor complex
GO:0005739 IEA mitochondrion
GO:0006351 IEA transcription, DNA-templated
GO:0014902 IMP myotube differentiation
GO:0043565 IDA sequence-specific DNA binding
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041098 barx2 BarH-like homeobox 2 protein_coding Danio_rerio
ENSG00000043039 BARX2 BARX homeobox 2 protein_coding Homo_sapiens

Loading