C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tumor necrosis factor receptor superfamily, member 17
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000048462 TNFRSF17 9606 + 16:11965107-11968068 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000053243 TNFRSF17-001 11965107-11968068 protein_coding
  ENST00000396495 TNFRSF17-003 11965213-11967995 protein_coding
  ENST00000562385 TNFRSF17-002 11965350-11967704 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLungOvaryPlacentaTestisENST00000053243ENST00000396495ENST00000562385
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Lung Ovary Placenta Testis
ENST00000053243 0.155±0.00 6.646±0.00 N/A N/A 1.172±0.41 1.442±1.38 0.034±0.00 N/A 0.272±0.00 0.558±0.33 0.078±0.00 0.972±0.61
ENST00000396495 N/A 2.589±0.00 1.896±0.00 1.085±0.00 0.512±0.24 0.210±0.00 N/A 0.119±0.00 N/A 0.167±0.05 0.051±0.00 0.291±0.00
ENST00000562385 N/A N/A N/A 0.179±0.00 0.259±0.00 N/A 0.028±0.00 0.142±0.00 0.251±0.00 0.156±0.00 0.020±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001LT CIL_0001LT_0001 CGP 16:11965107-12574289

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002376 IEA immune system process
GO:0004872 TAS receptor activity
GO:0005886 IEA plasma membrane
GO:0007165 TAS signal transduction
GO:0007275 TAS multicellular organismal development
GO:0008283 TAS cell proliferation
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000022496 Tnfrsf17 tumor necrosis factor receptor superfamily, member 17 protein_coding Mus_musculus

Loading