C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: adaptor-related protein complex 5, mu 1 subunit
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000053770 AP5M1 9606 + 14:57268909-57298742 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000261558 AP5M1-001 57268909-57298742 protein_coding
  ENST00000431972 AP5M1-003 57269056-57288925 protein_coding
  ENST00000554213 AP5M1-006 57269094-57271365 processed_transcript
  ENST00000554863 AP5M1-008 57282985-57286564 protein_coding
  ENST00000554931 AP5M1-002 57268924-57275469 retained_intron
  ENST00000555448 AP5M1-005 57269026-57283019 nonsense_mediated_decay
  ENST00000556377 AP5M1-009 57286223-57290074 nonsense_mediated_decay
  ENST00000556723 AP5M1-007 57278422-57283243 processed_transcript
  ENST00000556995 AP5M1-004 57268940-57274723 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000261558ENST00000431972ENST00000554931
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000261558 0.807±0.00 1.271±0.00 1.586±0.00 3.534±0.07 1.163±0.13 1.765±0.71 1.372±0.44 3.270±0.00 0.973±0.03 1.273±0.00 0.641±0.23 1.568±0.26 0.784±0.12 1.811±0.00
ENST00000431972 N/A N/A N/A N/A N/A N/A N/A 11.285±0.00 N/A N/A N/A N/A 2.962±0.00 N/A
ENST00000554931 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.080±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007P7 CIL_0007P7_0001 UCNEbase 14:56513836-57292417
CIL_000822 CIL_000822_0001 VISTA 14:56707426-57311372
CIL_0005ZZ CIL_0005ZZ_0002 CGP 14:56799905-57269008
CIL_000600 CIL_000600_0002 CGP 14:57200507-57298742
CIL_0005ZX CIL_0005ZX_0002 CGP 14:57268909-57415917

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005764 IDA lysosome
GO:0005770 IDA late endosome
GO:0005829 IDA cytosol
GO:0006886 IEA intracellular protein transport
GO:0016020 IDA membrane
GO:0016192 IEA vesicle-mediated transport
GO:0016197 IMP endosomal transport
GO:0030119 IDA AP-type membrane coat adaptor complex
GO:0030131 IEA clathrin adaptor complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000031533 ap5m1 adaptor-related protein complex 5, mu 1 subunit protein_coding Danio_rerio
ENSMUSG00000036291 Ap5m1 adaptor-related protein complex 5, mu 1 subunit protein_coding Mus_musculus

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