C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SUZ RNA binding domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000055070 SZRD1 9606 + 1:16352575-16398145 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000401088 SZRD1-001 16367083-16398142 protein_coding
  ENST00000401089 SZRD1-005 16367225-16398145 protein_coding
  ENST00000471507 SZRD1-007 16367088-16395406 protein_coding
  ENST00000472351 SZRD1-004 16367247-16395390 processed_transcript
  ENST00000472461 SZRD1-003 16367711-16395273 processed_transcript
  ENST00000475078 SZRD1-010 16352575-16393355 processed_transcript
  ENST00000475554 SZRD1-008 16367243-16395172 processed_transcript
  ENST00000476423 SZRD1-011 16367243-16393385 nonsense_mediated_decay
  ENST00000486763 SZRD1-009 16367235-16395139 processed_transcript
  ENST00000492354 SZRD1-006 16367265-16398142 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000401088ENST00000401089ENST00000471507ENST00000472351ENST00000492354
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000401088 N/A N/A N/A 1.206±0.00 N/A N/A 0.272±0.00 N/A 0.926±0.00 N/A N/A N/A N/A N/A
ENST00000401089 19.173±0.00 17.153±0.00 N/A 2.438±1.55 6.612±5.37 6.261±5.20 8.531±0.00 6.248±5.23 7.686±0.00 11.364±0.00 4.895±1.38 10.114±7.36 8.967±2.89 6.948±3.39
ENST00000471507 N/A N/A 1.230±0.00 5.138±4.83 N/A N/A N/A N/A N/A 1.563±0.00 N/A N/A N/A 19.534±0.00
ENST00000472351 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.338±0.00 N/A N/A
ENST00000492354 7.359±0.00 17.516±0.00 N/A 2.511±0.00 11.378±0.00 10.428±0.00 5.702±4.63 6.067±4.50 4.588±2.87 7.043±5.06 12.861±0.00 16.482±5.61 18.016±3.57 6.465±0.11

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056338 szrd1 SUZ RNA binding domain containing 1 protein_coding Danio_rerio
ENSMUSG00000040842 Szrd1 SUZ RNA binding domain containing 1 protein_coding Mus_musculus

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