C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SUZ RNA binding domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000040842 Szrd1 10090 - 4:141113001-141139775 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000039939 Szrd1-003 141113001-141139775 processed_transcript
  ENSMUST00000094549 Szrd1-002 141113001-141139775 processed_transcript
  ENSMUST00000102487 Szrd1-001 141113001-141139766 protein_coding
  ENSMUST00000128444 Szrd1-005 141116567-141139740 processed_transcript
  ENSMUST00000148204 Szrd1-004 141113001-141139727 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000039939ENSMUST00000094549ENSMUST00000102487ENSMUST00000148204
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000039939 3.192±0.04 7.333±2.27 N/A 1.690±0.00 4.588±2.16 6.094±0.37 1.883±0.21 4.445±0.89 3.849±1.27 5.166±1.55 4.343±0.00 6.601±1.69 3.952±2.08 N/A
ENSMUST00000094549 13.544±1.46 26.589±1.99 5.698±0.19 4.322±2.58 15.041±3.43 25.937±1.72 7.055±2.27 16.250±1.96 9.761±3.53 16.653±0.92 10.414±3.18 13.882±5.83 9.577±4.62 1.165±0.50
ENSMUST00000102487 3.410±0.79 N/A 11.415±1.07 5.312±2.41 2.385±0.00 N/A 2.185±0.44 3.636±0.57 3.940±1.13 4.499±0.36 17.016±3.25 8.011±4.56 5.501±2.44 1.539±0.53
ENSMUST00000148204 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.259±0.65 3.470±0.56 3.478±1.88 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056338 szrd1 SUZ RNA binding domain containing 1 protein_coding Danio_rerio
ENSG00000055070 SZRD1 SUZ RNA binding domain containing 1 protein_coding Homo_sapiens

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