C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: autophagy related 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000057663 ATG5 9606 - 6:106184476-106325820 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000343245 ATG5-002 106184476-106325417 protein_coding
  ENST00000360666 ATG5-201 106184483-106325820 protein_coding
  ENST00000369070 ATG5-003 106184476-106325791 protein_coding
  ENST00000369076 ATG5-001 106184476-106325791 protein_coding
  ENST00000475645 ATG5-005 106184476-106202429 processed_transcript
  ENST00000476518 ATG5-004 106201746-106279823 processed_transcript
  ENST00000613993 ATG5-202 106186540-106316208 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000343245ENST00000360666ENST00000369070ENST00000369076ENST00000476518ENST00000613993
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000343245 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.818±0.00 N/A N/A
ENST00000360666 N/A N/A 1.865±0.00 N/A N/A 0.576±0.00 N/A N/A 2.752±0.00 0.388±0.00 N/A N/A N/A
ENST00000369070 1.214±0.00 1.908±0.00 1.026±0.00 2.822±0.89 4.547±0.00 0.459±0.18 1.915±0.00 N/A 1.042±0.00 0.727±0.00 2.358±1.21 2.052±0.00 3.349±0.00
ENST00000369076 3.615±0.00 4.582±0.00 3.302±0.65 4.025±0.00 4.397±0.73 1.551±1.35 5.038±1.70 3.471±0.39 2.537±0.46 3.172±0.00 4.890±2.15 4.890±1.57 7.726±0.00
ENST00000476518 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.488±0.00 N/A N/A N/A
ENST00000613993 2.668±0.00 N/A 3.453±0.00 N/A N/A 2.082±0.00 N/A N/A 5.036±0.00 N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000045 ISS autophagic vacuole assembly
GO:0001974 IEA blood vessel remodeling
GO:0002739 IEA regulation of cytokine secretion involved in immune response
GO:0005515 IPI protein binding
GO:0005737 ISS:IEA cytoplasm
GO:0005776 IDA autophagic vacuole
GO:0005930 ISS axoneme
GO:0006914 ISS:IEA autophagy
GO:0006915 IEA apoptotic process
GO:0009620 IEA response to fungus
GO:0016020 IDA membrane
GO:0031397 IEA negative regulation of protein ubiquitination
GO:0032480 TAS negative regulation of type I interferon production
GO:0034045 ISS pre-autophagosomal structure membrane
GO:0039689 IEA negative stranded viral RNA replication
GO:0042311 IEA vasodilation
GO:0042493 IEA response to drug
GO:0043066 IEA negative regulation of apoptotic process
GO:0043687 ISS post-translational protein modification
GO:0044233 IEA ER-mitochondrion membrane contact site
GO:0045087 TAS innate immune response
GO:0048840 IEA otolith development
GO:0051279 IEA regulation of release of sequestered calcium ion into cytosol
GO:0055015 IEA ventricular cardiac muscle cell development
GO:0060047 IEA heart contraction
GO:0070257 IEA positive regulation of mucus secretion
GO:1902017 ISS regulation of cilium assembly
GO:2000377 IEA regulation of reactive oxygen species metabolic process
GO:2000619 IEA negative regulation of histone H4-K16 acetylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000023396 atg5 ATG5 autophagy related 5 homolog (S. cerevisiae) protein_coding Danio_rerio
ENSMUSG00000038160 Atg5 autophagy related 5 protein_coding Mus_musculus

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