C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: autophagy related 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000369076 ATG5-001 ENSG00000057663 9606 - 6:106184476-106325791 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000369076
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000369076 3.615±0.00 4.582±0.00 3.302±0.65 4.025±0.00 4.397±0.73 1.551±1.35 5.038±1.70 3.471±0.39 2.537±0.46 3.172±0.00 4.890±2.15 4.890±1.57 7.726±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000045 ISS autophagic vacuole assembly
GO:0001974 IEA blood vessel remodeling
GO:0002739 IEA regulation of cytokine secretion involved in immune response
GO:0005515 IPI protein binding
GO:0005737 ISS:IEA cytoplasm
GO:0005776 IDA autophagic vacuole
GO:0005930 ISS axoneme
GO:0006914 ISS:IEA autophagy
GO:0006915 IEA apoptotic process
GO:0009620 IEA response to fungus
GO:0016020 IDA membrane
GO:0031397 IEA negative regulation of protein ubiquitination
GO:0032480 TAS negative regulation of type I interferon production
GO:0034045 ISS pre-autophagosomal structure membrane
GO:0039689 IEA negative stranded viral RNA replication
GO:0042311 IEA vasodilation
GO:0042493 IEA response to drug
GO:0043066 IEA negative regulation of apoptotic process
GO:0043687 ISS post-translational protein modification
GO:0044233 IEA ER-mitochondrion membrane contact site
GO:0045087 TAS innate immune response
GO:0048840 IEA otolith development
GO:0051279 IEA regulation of release of sequestered calcium ion into cytosol
GO:0055015 IEA ventricular cardiac muscle cell development
GO:0060047 IEA heart contraction
GO:0070257 IEA positive regulation of mucus secretion
GO:1902017 ISS regulation of cilium assembly
GO:2000377 IEA regulation of reactive oxygen species metabolic process
GO:2000619 IEA negative regulation of histone H4-K16 acetylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000039286 Atg5-201 protein_coding Mus_musculus 0 1221

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