C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: phosphatidylinositol glycan anchor biosynthesis, class V
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000060642 PIGV 9606 + 1:26787472-26798398 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000078527 PIGV-001 26787995-26798398 protein_coding
  ENST00000374145 PIGV-002 26788195-26798393 protein_coding
  ENST00000430292 PIGV-003 26787472-26794250 protein_coding
  ENST00000431541 PIGV-005 26788098-26794396 protein_coding
  ENST00000455364 PIGV-006 26788928-26794581 protein_coding
  ENST00000472757 PIGV-004 26787964-26797807 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000078527ENST00000374145ENST00000430292ENST00000472757
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000078527 4.097±0.00 0.959±0.00 0.836±0.00 1.697±0.00 4.486±0.00 2.274±0.00 0.731±0.00 4.047±0.00 1.858±0.00 1.476±0.00 3.208±2.03 4.594±1.78 11.865±0.93
ENST00000374145 N/A N/A N/A N/A N/A N/A 0.363±0.06 0.572±0.00 0.246±0.04 0.415±0.00 0.593±0.00 N/A N/A
ENST00000430292 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.663±0.00 N/A N/A N/A
ENST00000472757 N/A N/A 3.929±0.00 N/A 0.466±0.00 N/A 0.283±0.00 5.764±3.88 1.612±0.00 1.156±0.00 2.371±0.55 2.054±0.50 9.675±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007T4 CIL_0007T4_0001 VISTA 1:26423129-27024414

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000030 IGI mannosyltransferase activity
GO:0005789 IDA endoplasmic reticulum membrane
GO:0006501 TAS C-terminal protein lipidation
GO:0006506 IEA:IGI GPI anchor biosynthetic process
GO:0016021 NAS integral component of membrane
GO:0016254 TAS preassembly of GPI anchor in ER membrane
GO:0016758 IEA transferase activity, transferring hexosyl groups
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0097502 IGI mannosylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000069807 zdhhc18a zinc finger, DHHC-type containing 18a protein_coding Danio_rerio
ENSMUSG00000043257 Pigv phosphatidylinositol glycan anchor biosynthesis, class V protein_coding Mus_musculus

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