C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphatidylinositol glycan anchor biosynthesis, class V
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000078527 PIGV-001 ENSG00000060642 9606 + 1:26787995-26798398 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000078527
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000078527 4.097±0.00 0.959±0.00 0.836±0.00 1.697±0.00 4.486±0.00 2.274±0.00 0.731±0.00 4.047±0.00 1.858±0.00 1.476±0.00 3.208±2.03 4.594±1.78 11.865±0.93

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007T4 CIL_0007T4_0001 VISTA 1:26423129-27024414

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000030 IGI mannosyltransferase activity
GO:0005789 IDA endoplasmic reticulum membrane
GO:0006501 TAS C-terminal protein lipidation
GO:0006506 IEA:IGI GPI anchor biosynthetic process
GO:0016021 NAS integral component of membrane
GO:0016254 TAS preassembly of GPI anchor in ER membrane
GO:0016758 IEA transferase activity, transferring hexosyl groups
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0097502 IGI mannosylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000062118 Pigv-001 protein_coding Mus_musculus 0 1452
ENSMUST00000151837 Pigv-003 processed_transcript Mus_musculus 0 213
ENSMUST00000067902 Pigv-002 protein_coding Mus_musculus 0 213

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