C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: branched chain amino-acid transaminase 1, cytosolic
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000060982 BCAT1 9606 - 12:24810022-24949459 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000261192 BCAT1-001 24810022-24949459 protein_coding
  ENST00000342945 BCAT1-002 24814821-24949086 protein_coding
  ENST00000355164 BCAT1-007 24945431-24949061 processed_transcript
  ENST00000538118 BCAT1-006 24814803-24902296 protein_coding
  ENST00000539282 BCAT1-004 24817481-24903075 protein_coding
  ENST00000539780 BCAT1-003 24817809-24949043 protein_coding
  ENST00000543099 BCAT1-009 24817656-24830328 processed_transcript
  ENST00000544418 BCAT1-005 24833811-24902388 processed_transcript
  ENST00000546285 BCAT1-008 24878536-24949049 protein_coding
  ENST00000612790 BCAT1-010 24836447-24881398 non_stop_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000261192ENST00000342945ENST00000538118ENST00000539282ENST00000539780
Transcript ID Bladder Brain Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000261192 0.073±0.00 N/A 0.179±0.00 0.104±0.00 N/A 0.564±0.00 N/A 1.437±0.55 1.984±1.53 0.324±0.00
ENST00000342945 N/A N/A N/A N/A 0.167±0.00 1.434±0.00 2.126±0.00 1.897±0.00 N/A N/A
ENST00000538118 N/A 2.253±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539282 0.155±0.00 N/A N/A 0.246±0.00 N/A 0.272±0.00 N/A N/A N/A N/A
ENST00000539780 N/A N/A 1.098±0.00 N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004XB CIL_0004XB_0001 CGP 12:23529500-24949459
CIL_0008XB CIL_0008XB_0001 VISTA 12:24459866-25061247

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000082 TAS G1/S transition of mitotic cell cycle
GO:0003824 IEA catalytic activity
GO:0004084 EXP:IEA branched-chain-amino-acid transaminase activity
GO:0005737 IEA cytoplasm
GO:0005739 IEA mitochondrion
GO:0005829 TAS cytosol
GO:0008152 IEA metabolic process
GO:0008283 TAS cell proliferation
GO:0009081 IEA branched-chain amino acid metabolic process
GO:0009082 IEA branched-chain amino acid biosynthetic process
GO:0009083 TAS branched-chain amino acid catabolic process
GO:0034641 TAS cellular nitrogen compound metabolic process
GO:0042802 IEA identical protein binding
GO:0044281 TAS small molecule metabolic process
GO:0052654 IEA L-leucine transaminase activity
GO:0052655 IEA L-valine transaminase activity
GO:0052656 IEA L-isoleucine transaminase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045568 bcat1 branched chain aminotransferase 1, cytosolic protein_coding Danio_rerio
ENSMUSG00000030268 Bcat1 branched chain aminotransferase 1, cytosolic protein_coding Mus_musculus

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