C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tetraspanin 32
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000064201 TSPAN32 9606 + 11:2301997-2318200 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000182290 TSPAN32-001 2302013-2318142 protein_coding
  ENST00000339046 TSPAN32-004 2302708-2318142 nonsense_mediated_decay
  ENST00000381117 TSPAN32-014 2302868-2317924 protein_coding
  ENST00000381121 TSPAN32-005 2302150-2318142 protein_coding
  ENST00000437313 TSPAN32-007 2301997-2310018 nonsense_mediated_decay
  ENST00000446063 TSPAN32-002 2302013-2318142 nonsense_mediated_decay
  ENST00000451520 TSPAN32-003 2302723-2318142 protein_coding
  ENST00000461200 TSPAN32-006 2302009-2318200 retained_intron
  ENST00000479508 TSPAN32-012 2302040-2315956 processed_transcript
  ENST00000483227 TSPAN32-019 2302147-2315660 processed_transcript
  ENST00000484104 TSPAN32-011 2302031-2314634 retained_intron
  ENST00000484523 TSPAN32-016 2306945-2316187 processed_transcript
  ENST00000486011 TSPAN32-013 2316636-2318142 processed_transcript
  ENST00000493924 TSPAN32-008 2302026-2318142 retained_intron
  ENST00000493948 TSPAN32-010 2302154-2314666 retained_intron
  ENST00000498313 TSPAN32-009 2302141-2316664 retained_intron
  ENST00000612299 TSPAN32-201 2302013-2318200 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonKidneyLiverOvaryPlacentaTestisENST00000339046ENST00000381117ENST00000381121ENST00000437313ENST00000451520ENST00000461200ENST00000483227ENST00000484104ENST00000484523ENST00000486011ENST00000493948ENST00000498313
Transcript ID Adipose Brain Breast Colon Kidney Liver Ovary Placenta Testis
ENST00000339046 N/A N/A N/A N/A N/A N/A 0.742±0.00 N/A N/A
ENST00000381117 N/A N/A N/A N/A N/A N/A N/A 0.408±0.10 0.204±0.00
ENST00000381121 0.205±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437313 N/A N/A N/A N/A N/A N/A N/A N/A 0.132±0.00
ENST00000451520 N/A N/A N/A N/A N/A N/A N/A 0.293±0.00 N/A
ENST00000461200 N/A 0.044±0.00 0.130±0.00 N/A 0.089±0.00 0.039±0.01 2.262±0.00 0.085±0.00 0.029±0.00
ENST00000483227 N/A N/A N/A 0.372±0.00 N/A N/A N/A N/A N/A
ENST00000484104 N/A N/A N/A 0.726±0.00 N/A N/A N/A N/A N/A
ENST00000484523 N/A N/A N/A N/A 0.144±0.00 0.288±0.00 N/A N/A N/A
ENST00000486011 N/A N/A 0.814±0.00 0.450±0.00 N/A N/A N/A 0.751±0.00 0.488±0.00
ENST00000493948 N/A N/A N/A N/A N/A 0.423±0.00 N/A N/A N/A
ENST00000498313 N/A N/A N/A N/A N/A N/A N/A 0.789±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009BT CIL_0009BT_0001 VISTA 11:2074187-2675527
CIL_0008VI CIL_0008VI_0001 VISTA 11:2150916-2751083
CIL_0008FP CIL_0008FP_0001 VISTA 11:2232763-2834370
CIL_0008A3 CIL_0008A3_0001 VISTA 11:2289701-2893486
CIL_00048A CIL_00048A_0001 CGP 11:2301997-2397419

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005622 IEA intracellular
GO:0007010 IEA cytoskeleton organization
GO:0007229 IEA integrin-mediated signaling pathway
GO:0007267 TAS cell-cell signaling
GO:0007596 IEA blood coagulation
GO:0007599 IEA hemostasis
GO:0008285 IEA negative regulation of cell proliferation
GO:0009986 IEA cell surface
GO:0016021 IEA integral component of membrane
GO:0030886 IEA negative regulation of myeloid dendritic cell activation
GO:0042832 IEA defense response to protozoan
GO:0050688 IEA regulation of defense response to virus
GO:0070442 IEA integrin alphaIIb-beta3 complex
GO:0070527 IEA platelet aggregation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000000244 Tspan32 tetraspanin 32 protein_coding Mus_musculus

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