C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ST3 beta-galactoside alpha-2,3-sialyltransferase 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000064225 ST3GAL6 9606 + 3:98732236-98821201 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000265261 ST3GAL6-201 98732236-98795845 protein_coding
  ENST00000394162 ST3GAL6-202 98732704-98795845 protein_coding
  ENST00000460774 ST3GAL6-008 98732265-98784976 protein_coding
  ENST00000462152 ST3GAL6-003 98732379-98793944 processed_transcript
  ENST00000465004 ST3GAL6-012 98733456-98756546 processed_transcript
  ENST00000466482 ST3GAL6-009 98732369-98782917 processed_transcript
  ENST00000468553 ST3GAL6-013 98763317-98782460 protein_coding
  ENST00000469105 ST3GAL6-002 98732266-98795254 nonsense_mediated_decay
  ENST00000474595 ST3GAL6-022 98772242-98793765 processed_transcript
  ENST00000476833 ST3GAL6-014 98763309-98782500 nonsense_mediated_decay
  ENST00000477574 ST3GAL6-020 98770389-98788072 protein_coding
  ENST00000477899 ST3GAL6-023 98783511-98791993 processed_transcript
  ENST00000480133 ST3GAL6-011 98732714-98770940 processed_transcript
  ENST00000483910 ST3GAL6-001 98732255-98794362 protein_coding
  ENST00000485145 ST3GAL6-021 98771055-98788438 protein_coding
  ENST00000485391 ST3GAL6-016 98763340-98788459 protein_coding
  ENST00000486249 ST3GAL6-004 98732450-98795845 nonsense_mediated_decay
  ENST00000486334 ST3GAL6-010 98732691-98788402 protein_coding
  ENST00000489112 ST3GAL6-007 98732236-98772969 retained_intron
  ENST00000490684 ST3GAL6-015 98763321-98773105 retained_intron
  ENST00000491912 ST3GAL6-025 98791859-98820997 processed_transcript
  ENST00000492254 ST3GAL6-018 98763353-98788426 protein_coding
  ENST00000493953 ST3GAL6-024 98784430-98791997 processed_transcript
  ENST00000495376 ST3GAL6-017 98763348-98783739 nonsense_mediated_decay
  ENST00000495502 ST3GAL6-026 98801305-98821201 processed_transcript
  ENST00000497008 ST3GAL6-019 98732475-98788195 protein_coding
  ENST00000497621 ST3GAL6-005 98732714-98794393 nonsense_mediated_decay
  ENST00000613264 ST3GAL6-203 98732704-98795845 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainHeartKidneyLiverMusclePlacentaENST00000394162ENST00000469105ENST00000483910ENST00000613264
Transcript ID Bladder Brain Heart Kidney Liver Muscle Placenta
ENST00000394162 N/A N/A N/A N/A N/A N/A 1.908±0.00
ENST00000469105 N/A 1.849±0.00 N/A 4.074±0.00 3.407±0.00 N/A 2.241±1.11
ENST00000483910 N/A N/A 9.306±0.00 N/A 6.949±0.00 2.220±0.00 4.506±1.26
ENST00000613264 1.581±0.00 N/A N/A 2.592±0.00 3.162±0.00 N/A 1.584±0.45

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0005794 IEA Golgi apparatus
GO:0005975 TAS carbohydrate metabolic process
GO:0006464 IDA cellular protein modification process
GO:0006486 IEA protein glycosylation
GO:0006664 IDA glycolipid metabolic process
GO:0008373 IEA sialyltransferase activity
GO:0009311 IDA oligosaccharide metabolic process
GO:0016021 NAS integral component of membrane
GO:0018146 TAS keratan sulfate biosynthetic process
GO:0030173 IEA integral component of Golgi membrane
GO:0030203 TAS glycosaminoglycan metabolic process
GO:0042339 TAS keratan sulfate metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0052798 IDA beta-galactoside alpha-2,3-sialyltransferase activity
GO:0070062 IDA extracellular vesicular exosome
GO:0071354 IEP cellular response to interleukin-6
GO:0097503 IEA sialylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000022747 St3gal6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 protein_coding Mus_musculus

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