C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ST3 beta-galactoside alpha-2,3-sialyltransferase 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022747 St3gal6 10090 - 16:58468125-58524243 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000114357 St3gal6-002 58470212-58524185 protein_coding
  ENSMUST00000114358 St3gal6-003 58469753-58524243 protein_coding
  ENSMUST00000123918 St3gal6-006 58493691-58524169 protein_coding
  ENSMUST00000125712 St3gal6-011 58493745-58523344 processed_transcript
  ENSMUST00000126978 St3gal6-005 58488932-58524169 protein_coding
  ENSMUST00000135721 St3gal6-013 58486421-58489425 retained_intron
  ENSMUST00000137035 St3gal6-001 58468125-58523426 protein_coding
  ENSMUST00000137850 St3gal6-014 58502861-58507898 retained_intron
  ENSMUST00000142900 St3gal6-008 58493754-58523724 processed_transcript
  ENSMUST00000145283 St3gal6-004 58502861-58523758 processed_transcript
  ENSMUST00000148061 St3gal6-012 58493743-58499341 processed_transcript
  ENSMUST00000149197 St3gal6-009 58475857-58523553 processed_transcript
  ENSMUST00000149456 St3gal6-010 58488919-58523444 processed_transcript
  ENSMUST00000151510 St3gal6-007 58493754-58524134 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000114357ENSMUST00000114358ENSMUST00000137035ENSMUST00000145283
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000114357 N/A N/A N/A N/A 7.290±0.62 17.542±2.78 N/A 4.308±0.22 2.762±1.75 N/A 16.500±4.05 4.772±0.16 12.572±6.13 N/A
ENSMUST00000114358 N/A N/A N/A N/A 7.544±0.00 12.049±0.00 N/A N/A N/A N/A 18.208±4.20 N/A 4.815±0.53 N/A
ENSMUST00000137035 6.047±0.88 3.238±0.38 9.253±0.99 5.311±1.05 6.514±1.23 7.014±2.57 4.504±0.40 5.310±0.71 2.688±1.93 10.189±0.54 3.851±0.00 7.516±0.98 3.770±0.86 2.372±0.55
ENSMUST00000145283 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.929±1.29

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0006464 ISS cellular protein modification process
GO:0006486 IEA protein glycosylation
GO:0006664 ISS glycolipid metabolic process
GO:0008373 ISO sialyltransferase activity
GO:0009311 ISS oligosaccharide metabolic process
GO:0030173 IEA integral component of Golgi membrane
GO:0052798 ISS beta-galactoside alpha-2,3-sialyltransferase activity
GO:0070062 IEA extracellular vesicular exosome
GO:0071354 ISS cellular response to interleukin-6
GO:0097503 ISO:IEA sialylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000064225 ST3GAL6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 protein_coding Homo_sapiens

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