C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000071073 MGAT4A 9606 - 2:98619106-98731126 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000264968 MGAT4A-001 98619106-98726696 protein_coding
  ENST00000393487 MGAT4A-201 98619106-98731126 protein_coding
  ENST00000409391 MGAT4A-002 98625505-98726832 protein_coding
  ENST00000414521 MGAT4A-202 98619108-98663473 protein_coding
  ENST00000460768 MGAT4A-008 98678421-98731093 processed_transcript
  ENST00000461884 MGAT4A-005 98655862-98663473 processed_transcript
  ENST00000484936 MGAT4A-009 98663078-98726881 processed_transcript
  ENST00000492163 MGAT4A-007 98645456-98663473 processed_transcript
  ENST00000495056 MGAT4A-006 98725939-98730248 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000264968ENST00000393487ENST00000409391ENST00000414521
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000264968 N/A N/A N/A N/A N/A 0.647±0.00 N/A N/A 2.409±0.00 N/A 2.058±0.00 N/A N/A
ENST00000393487 3.514±0.00 0.946±0.00 2.447±0.38 1.697±0.60 3.251±1.86 0.637±0.00 4.098±0.00 0.975±0.46 2.861±0.00 0.751±0.00 2.144±1.75 2.188±0.88 1.033±0.00
ENST00000409391 N/A N/A N/A 4.117±0.00 3.896±0.00 1.305±0.00 N/A 3.466±0.00 4.293±1.54 0.690±0.00 3.599±0.00 N/A N/A
ENST00000414521 N/A 2.493±0.00 2.105±0.00 N/A 1.565±0.00 N/A 5.007±0.00 0.558±0.00 2.264±0.00 N/A 5.480±6.41 6.451±0.00 1.456±0.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00034E CIL_00034E_0001 CGP 2:98608579-98731126
CIL_00034D CIL_00034D_0001 CGP 2:98619106-98936259

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0005975 IEA carbohydrate metabolic process
GO:0006487 IEA protein N-linked glycosylation
GO:0006491 TAS N-glycan processing
GO:0008375 IEA acetylglucosaminyltransferase activity
GO:0008454 IEA alpha-1,3-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016758 IEA transferase activity, transferring hexosyl groups
GO:0018279 TAS protein N-linked glycosylation via asparagine
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0046872 IEA metal ion binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000063330 mgat4a mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A protein_coding Danio_rerio
ENSMUSG00000026110 Mgat4a mannoside acetylglucosaminyltransferase 4, isoenzyme A protein_coding Mus_musculus

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