C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000409391 MGAT4A-002 ENSG00000071073 9606 - 2:98625505-98726832 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonHeartLiverLungMuscleOvaryENST00000409391
Transcript ID Breast Colon Heart Liver Lung Muscle Ovary
ENST00000409391 4.117±0.00 3.896±0.00 1.305±0.00 3.466±0.00 4.293±1.54 0.690±0.00 3.599±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00034E CIL_00034E_0001 CGP 2:98608579-98731126
CIL_00034D CIL_00034D_0001 CGP 2:98619106-98936259

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0005975 IEA carbohydrate metabolic process
GO:0006491 TAS N-glycan processing
GO:0008454 IEA alpha-1,3-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016758 IEA transferase activity, transferring hexosyl groups
GO:0018279 TAS protein N-linked glycosylation via asparagine
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0046872 IEA metal ion binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042161 Mgat4a-201 protein_coding Mus_musculus 0 1792
ENSMUST00000151952 Mgat4a-001 protein_coding Mus_musculus 0 1792
ENSMUST00000154819 Mgat4a-002 protein_coding Mus_musculus 0 1683
ENSMUST00000143636 Mgat4a-003 protein_coding Mus_musculus 0 1567

Loading