C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: WD repeat domain 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000071127 WDR1 9606 - 4:10074339-10116949 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000264785 WDR1-013 10097710-10106556 processed_transcript
  ENST00000382451 WDR1-201 10074340-10116949 protein_coding
  ENST00000382452 WDR1-202 10074340-10116949 protein_coding
  ENST00000499869 WDR1-001 10074339-10116860 protein_coding
  ENST00000502702 WDR1-002 10075149-10116727 protein_coding
  ENST00000502962 WDR1-005 10075343-10093155 processed_transcript
  ENST00000504739 WDR1-019 10084424-10093034 processed_transcript
  ENST00000505543 WDR1-015 10087706-10096618 processed_transcript
  ENST00000505851 WDR1-010 10097712-10116504 processed_transcript
  ENST00000506246 WDR1-020 10084424-10092939 processed_transcript
  ENST00000508079 WDR1-011 10088287-10116339 protein_coding
  ENST00000508949 WDR1-016 10087706-10096578 processed_transcript
  ENST00000509600 WDR1-009 10115894-10116868 retained_intron
  ENST00000509695 WDR1-018 10087842-10094896 processed_transcript
  ENST00000510848 WDR1-017 10087776-10096174 processed_transcript
  ENST00000514319 WDR1-012 10097844-10116462 processed_transcript
  ENST00000515018 WDR1-014 10098990-10106499 processed_transcript
  ENST00000515743 WDR1-006 10075149-10093019 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000264785ENST00000382452ENST00000499869ENST00000502702ENST00000508079ENST00000515018
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000264785 N/A N/A N/A N/A N/A N/A 4.940±0.00 7.622±0.00 N/A N/A N/A N/A 73.960±0.00 54.909±0.00
ENST00000382452 71.981±0.00 71.549±0.00 6.029±0.00 15.973±11.42 33.088±18.46 44.183±27.60 20.084±18.92 40.829±39.63 27.106±1.18 105.765±0.00 14.149±12.89 69.059±49.48 84.256±40.12 41.425±19.94
ENST00000499869 N/A N/A N/A 3.363±0.00 N/A N/A N/A N/A N/A 3.560±0.00 N/A N/A N/A N/A
ENST00000502702 36.428±0.00 N/A N/A N/A N/A N/A 16.015±0.00 35.105±0.00 8.525±0.00 64.112±0.00 25.234±0.00 N/A N/A 46.724±0.00
ENST00000508079 N/A N/A 11.143±0.00 26.313±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515018 N/A N/A N/A 24.255±0.00 N/A 70.630±0.00 15.404±0.00 N/A N/A N/A 12.316±0.00 131.764±0.00 N/A 200.678±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008UW CIL_0008UW_0001 VISTA 4:10015545-10620462
CIL_0001XG CIL_0001XG_0001 CGP 4:10074339-10457410

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002576 TAS platelet degranulation
GO:0003779 IEA actin binding
GO:0005515 IEA protein binding
GO:0005576 TAS extracellular region
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0005856 IEA cytoskeleton
GO:0005884 IEA actin filament
GO:0007596 TAS blood coagulation
GO:0007605 TAS sensory perception of sound
GO:0030054 IEA cell junction
GO:0030168 TAS platelet activation
GO:0042995 IEA cell projection
GO:0048713 IEA regulation of oligodendrocyte differentiation
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077991 WDR1 WD repeat domain 1 protein_coding Danio_rerio
ENSMUSG00000005103 Wdr1 WD repeat domain 1 protein_coding Mus_musculus

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