C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001XG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000071127-ENSG00000178163 CGP 9606 4:10074339-10457410
GeneTranscriptPositionBiotype
ENSG00000071127 (WDR1)
WD repeat domain 1 		ENST00000264785 (WDR1-013) 10097710-10106556 processed_transcript
ENST00000382451 (WDR1-201) 10074340-10116949 protein_coding
ENST00000382452 (WDR1-202) 10074340-10116949 protein_coding
ENST00000499869 (WDR1-001) 10074339-10116860 protein_coding
ENST00000502702 (WDR1-002) 10075149-10116727 protein_coding
ENST00000502962 (WDR1-005) 10075343-10093155 processed_transcript
ENST00000504739 (WDR1-019) 10084424-10093034 processed_transcript
ENST00000505543 (WDR1-015) 10087706-10096618 processed_transcript
ENST00000505851 (WDR1-010) 10097712-10116504 processed_transcript
ENST00000506246 (WDR1-020) 10084424-10092939 processed_transcript
ENST00000508079 (WDR1-011) 10088287-10116339 protein_coding
ENST00000508949 (WDR1-016) 10087706-10096578 processed_transcript
ENST00000509600 (WDR1-009) 10115894-10116868 retained_intron
ENST00000509695 (WDR1-018) 10087842-10094896 processed_transcript
ENST00000510848 (WDR1-017) 10087776-10096174 processed_transcript
ENST00000514319 (WDR1-012) 10097844-10116462 processed_transcript
ENST00000515018 (WDR1-014) 10098990-10106499 processed_transcript
ENST00000515743 (WDR1-006) 10075149-10093019 processed_transcript
ENSG00000178163 (ZNF518B)
zinc finger protein 518B 		ENST00000326756 (ZNF518B-001) 10439874-10457360 protein_coding
ENST00000500268 (ZNF518B-006) 10450887-10457176 retained_intron
ENST00000503068 (ZNF518B-005) 10450887-10457410 retained_intron
ENST00000507515 (ZNF518B-002) 10446102-10457405 protein_coding
ENST00000515072 (ZNF518B-004) 10450887-10457408 processed_transcript
ENSG00000223086 (RNA5SP155)
RNA, 5S ribosomal pseudogene 155 		ENST00000411154 (RNA5SP155-201) 10115756-10115884 rRNA
ENSG00000248777 (AC006499.6)
 ENST00000511870 (AC006499.6-001) 10199823-10200672 processed_pseudogene
ENSG00000250040 (RAF1P1)
RAF1 pseudogene 1 		ENST00000508566 (RAF1P1-001) 10254926-10256621 processed_pseudogene
ENSG00000250393 (RP11-480G3.1)
 ENST00000511779 (RP11-480G3.1-001) 10143367-10143655 processed_pseudogene
ENSG00000250505 (AC006499.3)
 ENST00000506077 (AC006499.3-001) 10284961-10285708 processed_pseudogene
ENSG00000250573 (AC006499.5)
 ENST00000510947 (AC006499.5-001) 10259445-10260138 processed_pseudogene
ENSG00000250613 (RP11-136I13.1)
 ENST00000506540 (RP11-136I13.1-001) 10410996-10411644 processed_pseudogene
ENSG00000251338 (AC006499.1)
 ENST00000512421 (AC006499.1-001) 10294463-10295579 processed_pseudogene
CIL_0001XG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000005103-ENSMUSG00000046572 CGP 10090 5:38526814-38684826
GeneTranscriptPositionBiotype
ENSMUSG00000005103 (Wdr1)
WD repeat domain 1 		ENSMUST00000005234 (Wdr1-201) 38526814-38561666 protein_coding
ENSMUSG00000046572 (Zfp518b)
zinc finger protein 518B 		ENSMUST00000057258 (Zfp518b-001) 38668484-38684750 protein_coding
ENSMUST00000178760 (Zfp518b-003) 38674627-38684757 protein_coding
ENSMUST00000179555 (Zfp518b-201) 38668484-38684826 protein_coding
ENSMUST00000180214 (Zfp518b-002) 38674176-38684826 protein_coding
ENSMUSG00000064419 (Gm22249)
predicted gene, 22249 		ENSMUST00000082485 (Gm22249-201) 38546458-38546593 snRNA
ENSMUSG00000086422 (4930421P07Rik)
RIKEN cDNA 4930421P07 gene 		ENSMUST00000147322 (4930421P07Rik-001) 38575031-38575429 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001XG_0001ENSG00000071127ENST00000264785ENST00000382451ENST00000382452ENST00000499869ENST00000502702ENST00000502962ENST00000504739ENST00000505543ENST00000505851ENST00000506246ENST00000508079ENST00000508949ENST00000509600ENST00000509695ENST00000510848ENST00000514319ENST00000515018ENST00000515743ENSG00000178163ENST00000326756ENST00000500268ENST00000503068ENST00000507515ENST00000515072ENSG00000223086ENST00000411154ENSG00000248777ENST00000511870ENSG00000250040ENST00000508566ENSG00000250393ENST00000511779ENSG00000250505ENST00000506077ENSG00000250573ENST00000510947ENSG00000250613ENST00000506540ENSG00000251338ENST00000512421CIL_0001XG_0002ENSMUSG00000005103ENSMUST00000005234ENSMUSG00000046572ENSMUST00000057258ENSMUST00000178760ENSMUST00000179555ENSMUST00000180214ENSMUSG00000064419ENSMUST00000082485ENSMUSG00000086422ENSMUST00000147322
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001XG_0001ENSG00000071127ENST00000264785ENST00000382452ENST00000499869ENST00000502702ENST00000508079ENST00000515018ENSG00000178163ENST00000326756ENST00000500268ENST00000503068ENSG00000223086ENST00000411154ENSG00000248777ENST00000511870ENSG00000250040ENST00000508566ENSG00000250393ENST00000511779ENSG00000250505ENST00000506077ENSG00000250573ENST00000510947ENSG00000250613ENST00000506540ENSG00000251338ENST00000512421CIL_0001XG_0002ENSMUSG00000005103ENSMUST00000005234ENSMUSG00000046572ENSMUST00000057258ENSMUST00000178760ENSMUST00000179555ENSMUST00000180214ENSMUSG00000064419ENSMUST00000082485ENSMUSG00000086422ENSMUST00000147322
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000071127 ENST00000264785 N/A N/A N/A N/A N/A N/A 4.940±0.00 7.622±0.00 N/A N/A N/A N/A 73.960±0.00 54.909±0.00
ENST00000382451 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000382452 71.981±0.00 71.549±0.00 6.029±0.00 15.973±11.42 33.088±18.46 44.183±27.60 20.084±18.92 40.829±39.63 27.106±1.18 105.765±0.00 14.149±12.89 69.059±49.48 84.256±40.12 41.425±19.94
ENST00000499869 N/A N/A N/A 3.363±0.00 N/A N/A N/A N/A N/A 3.560±0.00 N/A N/A N/A N/A
ENST00000502702 36.428±0.00 N/A N/A N/A N/A N/A 16.015±0.00 35.105±0.00 8.525±0.00 64.112±0.00 25.234±0.00 N/A N/A 46.724±0.00
ENST00000502962 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504739 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505543 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505851 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506246 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508079 N/A N/A 11.143±0.00 26.313±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508949 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509600 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509695 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510848 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514319 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515018 N/A N/A N/A 24.255±0.00 N/A 70.630±0.00 15.404±0.00 N/A N/A N/A 12.316±0.00 131.764±0.00 N/A 200.678±0.00
ENST00000515743 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000178163 ENST00000326756 1.239±0.00 0.658±0.00 N/A 2.162±0.00 N/A 0.759±0.00 1.522±0.74 N/A 0.635±0.40 1.873±1.22 N/A 1.533±0.88 0.441±0.17 3.326±0.00
ENST00000500268 N/A N/A N/A N/A N/A N/A N/A 0.589±0.16 N/A N/A 0.618±0.00 1.032±0.31 N/A 1.686±0.10
ENST00000503068 1.218±0.00 0.761±0.00 N/A 1.033±0.00 1.257±0.36 0.941±0.30 1.193±0.00 N/A 1.510±0.00 1.036±0.06 N/A 0.766±0.37 0.929±0.12 N/A
ENST00000507515 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515072 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000223086 ENST00000411154 N/A 0.213±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.658±0.00 1.842±0.00 0.512±0.12
ENSG00000248777 ENST00000511870 N/A N/A N/A 0.040±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000250040 ENST00000508566 N/A N/A N/A 0.165±0.00 N/A 0.200±0.00 N/A N/A N/A N/A N/A 0.055±0.00 N/A 0.016±0.00
ENSG00000250393 ENST00000511779 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.965±0.59
ENSG00000250505 ENST00000506077 N/A N/A 0.462±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.036±0.00
ENSG00000250573 ENST00000510947 N/A N/A N/A N/A N/A 0.162±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000250613 ENST00000506540 N/A N/A N/A N/A N/A N/A N/A 0.039±0.00 N/A N/A N/A N/A N/A 0.106±0.00
ENSG00000251338 ENST00000512421 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.035±0.00 N/A 0.020±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000005103 ENSMUST00000005234 66.020±7.92 39.307±3.73 117.598±8.94 34.887±9.79 66.068±7.66 108.633±10.76 42.298±3.10 45.587±6.03 27.359±10.53 61.854±1.24 14.465±1.83 78.720±16.33 124.731±24.43 14.078±1.83
ENSMUSG00000046572 ENSMUST00000057258 1.531±0.49 0.588±0.17 0.271±0.13 0.940±0.20 0.463±0.00 0.739±0.11 N/A 0.254±0.14 0.148±0.09 N/A 0.463±0.00 1.887±0.38 1.975±1.37 0.381±0.10
ENSMUST00000178760 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.206±0.00 N/A N/A
ENSMUST00000179555 0.512±0.05 N/A 0.973±0.07 3.615±2.74 0.652±0.28 0.256±0.00 0.577±0.16 0.475±0.24 0.347±0.12 1.145±0.03 0.485±0.17 1.176±0.51 1.471±0.92 0.302±0.21
ENSMUST00000180214 N/A N/A N/A N/A N/A N/A N/A 0.455±0.00 N/A N/A N/A N/A N/A N/A
ENSMUSG00000064419 ENSMUST00000082485 N/A N/A 17.911±10.74 6.767±0.00 N/A N/A N/A N/A 3.052±0.00 N/A N/A 12.552±0.00 35.322±17.01 N/A
ENSMUSG00000086422 ENSMUST00000147322 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.263±0.00

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