C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: collapsin response mediator protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000072832 CRMP1 9606 - 4:5748084-5893058 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000324989 CRMP1-001 5820764-5893058 protein_coding
  ENST00000397890 CRMP1-003 5820783-5888481 protein_coding
  ENST00000506216 CRMP1-005 5748084-5888471 processed_transcript
  ENST00000511535 CRMP1-004 5820784-5887813 processed_transcript
  ENST00000512574 CRMP1-002 5821243-5890191 protein_coding
  ENST00000513911 CRMP1-006 5820784-5826861 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000324989ENST00000397890ENST00000512574ENST00000513911
Transcript ID Adrenal Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000324989 N/A 4.382±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.783±0.00
ENST00000397890 N/A 26.304±18.06 N/A N/A N/A N/A 5.506±0.00 0.476±0.00 3.814±2.23 6.411±0.60 2.032±0.00
ENST00000512574 N/A N/A N/A N/A 0.430±0.00 N/A N/A N/A N/A N/A N/A
ENST00000513911 0.874±0.00 N/A 2.077±0.00 1.988±0.00 N/A 1.866±1.76 N/A N/A 2.573±0.00 N/A 2.174±0.15

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IDA:IEA cytoplasm
GO:0005829 TAS cytosol
GO:0005856 IEA cytoskeleton
GO:0006139 TAS nucleobase-containing compound metabolic process
GO:0006208 IEA pyrimidine nucleobase catabolic process
GO:0007399 TAS nervous system development
GO:0007411 TAS axon guidance
GO:0016787 IEA hydrolase activity
GO:0016810 IEA hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0016812 IEA hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
GO:0030425 IEA dendrite
GO:0043025 IEA neuronal cell body
GO:0048666 IEA neuron development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056742 crmp1 collapsin response mediator protein 1 protein_coding Danio_rerio
ENSMUSG00000029121 Crmp1 collapsin response mediator protein 1 protein_coding Mus_musculus

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