C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: lethal giant larvae homolog 2 (Drosophila)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000073350 LLGL2 9606 + 17:75525080-75575208 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000167462 LLGL2-002 75525726-75575208 protein_coding
  ENST00000375227 LLGL2-006 75525732-75564721 protein_coding
  ENST00000392550 LLGL2-001 75525739-75575207 protein_coding
  ENST00000545227 LLGL2-007 75557805-75575208 retained_intron
  ENST00000577200 LLGL2-004 75532493-75574906 protein_coding
  ENST00000577211 LLGL2-021 75574154-75575207 retained_intron
  ENST00000577500 LLGL2-010 75567920-75575207 retained_intron
  ENST00000578034 LLGL2-022 75573952-75574668 retained_intron
  ENST00000578363 LLGL2-005 75525779-75564723 protein_coding
  ENST00000578536 LLGL2-024 75542635-75558572 protein_coding
  ENST00000578638 LLGL2-009 75563774-75575194 nonsense_mediated_decay
  ENST00000578719 LLGL2-018 75568818-75570436 nonsense_mediated_decay
  ENST00000579092 LLGL2-019 75571425-75573253 retained_intron
  ENST00000579392 LLGL2-013 75525789-75558566 protein_coding
  ENST00000580027 LLGL2-008 75562280-75564700 retained_intron
  ENST00000580578 LLGL2-012 75525080-75559332 protein_coding
  ENST00000580925 LLGL2-003 75543154-75556089 protein_coding
  ENST00000581713 LLGL2-014 75543261-75559299 protein_coding
  ENST00000582393 LLGL2-023 75573577-75575121 retained_intron
  ENST00000582860 LLGL2-016 75558975-75563369 retained_intron
  ENST00000583514 LLGL2-020 75573555-75574921 nonsense_mediated_decay
  ENST00000583658 LLGL2-015 75546148-75559345 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000167462ENST00000375227ENST00000392550ENST00000545227ENST00000577200ENST00000577500ENST00000578363ENST00000578638ENST00000578719ENST00000579092ENST00000580027ENST00000582393ENST00000582860
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000167462 N/A N/A N/A 1.142±0.00 N/A N/A 17.098±0.00 N/A N/A N/A 14.775±9.01 2.493±1.01 2.462±0.00
ENST00000375227 N/A N/A 1.039±0.00 N/A 4.495±0.00 N/A 2.055±0.00 5.425±0.00 14.128±0.00 0.335±0.00 4.423±0.02 3.847±0.00 4.547±0.00
ENST00000392550 0.662±0.00 N/A 0.058±0.00 N/A 4.412±0.00 0.208±0.00 N/A N/A N/A N/A 4.527±1.70 4.649±1.02 N/A
ENST00000545227 N/A N/A N/A N/A N/A N/A N/A 3.201±0.00 0.687±0.00 N/A N/A N/A 0.782±0.00
ENST00000577200 N/A 1.178±0.00 0.538±0.00 0.708±0.00 2.974±0.00 N/A N/A 2.673±0.00 N/A 0.600±0.00 4.729±0.00 N/A N/A
ENST00000577500 N/A N/A 0.152±0.00 N/A N/A N/A N/A N/A 3.849±0.00 N/A N/A N/A N/A
ENST00000578363 N/A N/A 0.207±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578638 N/A N/A N/A N/A 2.791±0.00 N/A 12.689±0.00 2.375±2.23 6.604±0.00 0.448±0.00 N/A 3.498±0.00 N/A
ENST00000578719 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.196±0.00 6.697±0.00
ENST00000579092 N/A 4.467±0.00 N/A 4.143±0.00 N/A N/A N/A N/A N/A 0.124±0.00 N/A N/A N/A
ENST00000580027 N/A N/A N/A N/A N/A 0.170±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000582393 N/A N/A N/A N/A N/A 0.941±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000582860 N/A N/A N/A N/A N/A N/A N/A N/A 4.336±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PW CIL_0008PW_0001 VISTA 17:75051738-75652852
CIL_0007IP CIL_0007IP_0001 CGP 17:75516060-75575208

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 IDA cytoplasm
GO:0006887 IEA exocytosis
GO:0007049 IEA cell cycle
GO:0030165 IPI PDZ domain binding
GO:0032878 IDA regulation of establishment or maintenance of cell polarity
GO:0051301 IEA cell division

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000023920 llgl2 lethal giant larvae homolog 2 (Drosophila) protein_coding Danio_rerio
ENSMUSG00000020782 Llgl2 lethal giant larvae homolog 2 (Drosophila) protein_coding Mus_musculus

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