C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromosome 17 open reading frame 85
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000074356 C17orf85 9606 - 17:3811523-3846251 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000389005 C17orf85-001 3812147-3846251 protein_coding
  ENST00000574379 C17orf85-005 3818263-3822456 retained_intron
  ENST00000574911 C17orf85-004 3811523-3825021 nonsense_mediated_decay
  ENST00000575815 C17orf85-002 3811528-3829291 retained_intron
  ENST00000576523 C17orf85-006 3812540-3813250 protein_coding
  ENST00000577169 C17orf85-003 3822504-3826117 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000389005ENST00000574379ENST00000574911ENST00000575815
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000389005 3.361±0.00 3.461±0.00 1.171±0.00 4.404±0.00 2.408±1.60 1.905±0.71 2.140±0.99 1.962±0.00 0.728±0.00 2.776±0.00 1.157±0.53 4.879±2.27 5.676±2.92 5.933±0.78
ENST00000574379 N/A N/A N/A N/A 2.038±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574911 N/A 1.829±0.00 N/A N/A N/A 1.754±0.00 N/A N/A N/A N/A 0.722±0.00 2.387±0.24 1.122±0.00 1.910±0.00
ENST00000575815 N/A N/A N/A N/A N/A N/A N/A 0.599±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000044597 C21H17orf85 chromosome 17 open reading frame 85 protein_coding Danio_rerio
ENSMUSG00000020783 1200014J11Rik RIKEN cDNA 1200014J11 gene protein_coding Mus_musculus

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