C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromosome 17 open reading frame 85
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000389005 C17orf85-001 ENSG00000074356 9606 - 17:3812147-3846251 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000389005
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000389005 3.361±0.00 3.461±0.00 1.171±0.00 4.404±0.00 2.408±1.60 1.905±0.71 2.140±0.99 1.962±0.00 0.728±0.00 2.776±0.00 1.157±0.53 4.879±2.27 5.676±2.92 5.933±0.78

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021135 1200014J11Rik-001 protein_coding Mus_musculus 0 3094
ENSMUST00000151823 1200014J11Rik-002 retained_intron Mus_musculus 0 520
ENSMUST00000144262 1200014J11Rik-003 retained_intron Mus_musculus 0 520
ENSMUST00000169190 Bend4-201 protein_coding Mus_musculus 0.0001 55

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