C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: carbonic anhydrase XII
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000074410 CA12 9606 - 15:63321378-63382161 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000178638 CA12-001 63321378-63382161 protein_coding
  ENST00000344366 CA12-002 63324688-63381835 protein_coding
  ENST00000422263 CA12-003 63324707-63381846 protein_coding
  ENST00000558287 CA12-004 63340022-63342074 retained_intron
  ENST00000560293 CA12-006 63375460-63379073 retained_intron
  ENST00000560666 CA12-005 63325980-63331813 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000178638ENST00000344366ENST00000422263ENST00000558287ENST00000560293ENST00000560666
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000178638 0.508±0.00 N/A 10.439±0.00 0.059±0.00 0.639±0.25 9.171±0.00 0.041±0.00 0.013±0.00 0.195±0.19 0.263±0.00 N/A 2.679±0.72 0.427±0.32 0.527±0.00
ENST00000344366 0.535±0.00 1.811±0.00 48.765±0.00 0.245±0.00 3.559±2.78 37.272±0.00 N/A 23.672±23.67 2.515±0.00 0.587±0.00 N/A 4.519±2.34 0.877±0.39 N/A
ENST00000422263 1.204±0.00 N/A N/A 0.502±0.01 0.931±0.00 N/A 0.100±0.05 N/A N/A 0.849±0.00 0.208±0.00 10.639±0.00 N/A 0.772±0.44
ENST00000558287 N/A N/A N/A N/A N/A N/A N/A N/A 0.019±0.00 N/A N/A N/A N/A N/A
ENST00000560293 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.317±0.00
ENST00000560666 N/A N/A N/A N/A N/A N/A 0.107±0.00 N/A N/A 1.591±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00094O CIL_00094O_0001 VISTA 15:62748846-63351985
CIL_00098V CIL_00098V_0001 VISTA 15:62790346-63394142

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004089 IEA carbonate dehydratase activity
GO:0005886 TAS plasma membrane
GO:0006730 IEA one-carbon metabolic process
GO:0008270 IEA zinc ion binding
GO:0015701 TAS bicarbonate transport
GO:0016021 IEA integral component of membrane
GO:0044281 TAS small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045644 CA12 carbonic anhydrase XII protein_coding Danio_rerio
ENSMUSG00000032373 Car12 carbonic anyhydrase 12 protein_coding Mus_musculus

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