C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: carbonic anyhydrase 12
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032373 Car12 10090 + 9:66713686-66766845 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000071889 Car12-001 66713686-66766845 protein_coding
  ENSMUST00000085420 Car12-002 66713730-66766842 protein_coding
  ENSMUST00000123195 Car12-005 66713728-66747878 retained_intron
  ENSMUST00000134829 Car12-006 66747710-66764317 protein_coding
  ENSMUST00000152011 Car12-003 66713727-66754474 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000071889ENSMUST00000085420ENSMUST00000123195ENSMUST00000152011
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000071889 2.758±2.06 0.063±0.00 0.299±0.03 1.117±0.64 0.700±0.20 10.277±1.69 N/A 106.309±3.30 0.062±0.05 0.559±0.13 N/A 4.834±2.67 0.352±0.04 N/A
ENSMUST00000085420 1.067±0.97 0.040±0.01 N/A 1.197±0.61 0.232±0.00 N/A 0.010±0.00 N/A 0.110±0.03 1.196±0.50 0.054±0.03 1.026±0.74 0.120±0.07 0.348±0.17
ENSMUST00000123195 0.121±0.00 0.193±0.12 N/A N/A 0.537±0.14 14.007±0.00 N/A N/A 0.090±0.05 N/A N/A 8.858±2.34 0.104±0.00 0.714±0.00
ENSMUST00000152011 0.077±0.01 0.085±0.00 N/A N/A 0.451±0.14 4.048±1.64 N/A 38.783±4.10 0.046±0.01 0.645±0.33 N/A 4.327±1.94 0.074±0.00 0.526±0.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098V CIL_00098V_0002 VISTA 9:66700483-67304558

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004089 IDA carbonate dehydratase activity
GO:0005575 ND cellular_component
GO:0006730 IEA one-carbon metabolic process
GO:0006885 IC regulation of pH
GO:0008152 IEA metabolic process
GO:0008270 IEA zinc ion binding
GO:0015670 IC carbon dioxide transport
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045644 CA12 carbonic anhydrase XII protein_coding Danio_rerio
ENSG00000074410 CA12 carbonic anhydrase XII protein_coding Homo_sapiens

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